Pteronotus mesoamericanus (Parnell's mustached bat): 129079404
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Entry
129079404 CDS
T09558
Symbol
NCBP1
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Pathway
ppam03013
Nucleocytoplasmic transport
ppam03015
mRNA surveillance pathway
ppam03040
Spliceosome
ppam05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129079404 (NCBP1)
09122 Translation
03013 Nucleocytoplasmic transport
129079404 (NCBP1)
03015 mRNA surveillance pathway
129079404 (NCBP1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
129079404 (NCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppam03019
]
129079404 (NCBP1)
03041 Spliceosome [BR:
ppam03041
]
129079404 (NCBP1)
Messenger RNA biogenesis [BR:
ppam03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
129079404 (NCBP1)
Spliceosome [BR:
ppam03041
]
Common components
Common spliceosomal components
Cap binding complex
129079404 (NCBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G
MIF4G_like
Cob_adeno_trans
DUF2524
Motif
Other DBs
NCBI-GeneID:
129079404
NCBI-ProteinID:
XP_054440604
LinkDB
All DBs
Position
Unknown
AA seq
790 aa
AA seq
DB search
MSRRRHSDENDGGQPHKRRKTSDANETEDHLESLICKVGEKSACSLESNLEGLAGVLEAD
LPNYKSKILRLLCTVARLLPEKLTIYTTLVGLLNARNYNFGGEFVEAMIRQLKESLKANN
YNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRRDWYVYAFLSSLPWV
GKELYEKKDAEMDRIFANTESYLKRRQKTHVPMLQVWTAEKPHPQEEYLDCLWAQIQKLK
KDRWQERHILRPYLAFDSILCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDPEG
PVMPGSHSVERFVIEENLHCIIKSHWKERKTCAAQLVSYPGKNKIPLNYHIVEVIFAELF
QLPAPPHIEVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCVDRFINWFSHH
LSNFQFRWSWEDWSDCLTQDPESPKPKFVREVLEKCMRLSYHQRILDIVPPTFSALCPAN
PTCIYKYGDESSNSLPGHSVALCLAVAFKSKATNDEIFGILKDVPNPNQDDDDDEGFSFN
PLKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVMFEVWRNHPQM
IAVLVDKMIRTQIVDCAAVANWIFSSELSRDFTRLFVWEILHSTIRKMNKHVLKIQKELE
EAKEKLARQHKRRSDDDDRSSDRKDGALEEQIERLQEKVESAQSEQKNLFLVIFQRFIMI
LTEHLVRCETDGTSVLTPWYKNCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDPHILA
VFQQFCALQA
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcggcggcacagcgatgagaacgatgggggacagcctcacaaacggagaaag
acctctgatgcaaatgaaactgaagatcatttggaatctttaatatgcaaagtaggagaa
aagagtgcctgctctttggagagcaacctagaaggcttggctggtgttttggaagctgat
cttcctaactacaagagcaagatcttaaggcttctttgtacagttgcacgtctgttaccc
gagaagttgacaatttatacaacattagttggactgctgaatgccaggaattacaacttt
ggtggagaatttgtagaagccatgattcgtcaacttaaagaatctttgaaagcaaacaac
tataatgaagctgtatatttggttcgttttttatctgatcttgtgaattgtcacgtcatt
gcagccccatcaatggtagctatgtttgaaaattttgtaagtgtaactcaggaagaggat
gtacctcaggtgcgacgggattggtacgtgtatgcatttctgtcctctttgccctgggtt
ggaaaggagttgtatgagaagaaggatgcagagatggaccgcatctttgccaacactgaa
agctatcttaaaagacgccaaaagactcatgtgcccatgctacaagtatggactgctgag
aaaccacatccacaagaagagtatttagattgcctgtgggcccagattcagaaattgaaa
aaggatcgctggcaggagcggcacatcctaagaccttatcttgcctttgacagcatcctg
tgtgaagcacttcagcacaatttgcctcctttcacaccacctcctcacactgaggattca
gtgtacccaatgccaagggtcatcttcagaatgtttgattacacagatgatcccgagggc
cctgtaatgccagggagtcattcagtggaaagatttgtaatagaagagaatcttcactgc
atcattaagtcccactggaaggaaagaaagacttgtgctgcacagctggtgagctatcca
gggaagaacaagatccccttgaactaccacatagttgaggtgatctttgcagagctgttt
caacttccagcaccacctcacattgaagtgatgtacacaacacttctcattgaactgtgc
aaacttcagcctggctctctaccccaagttcttgcacaggcaactgaaatgctgtacatg
cgtttggacacaatgaataccacttgtgtagacaggtttattaattggttttcgcatcat
ctaagtaacttccagttccgttggagctgggaagattggtcagattgtcttactcaagat
cctgaaagtcccaaaccaaagtttgtaagagaagttctagaaaaatgtatgcggttgtct
taccatcagcgtatattagatattgttcctcctaccttctcagctctatgccctgcaaac
ccaacctgcatttacaagtatggagatgaaagtagcaattctcttcctggacattcagtt
gccctctgtttagctgttgcctttaaaagcaaagcaaccaatgatgaaatcttcggcatt
ctgaaagatgtaccaaacccgaaccaagacgacgatgatgatgaagggttcagcttcaac
ccattgaaaatagaggtctttgtgcagactctgctacacttggcagccaagtccttcagc
cactcctttagtgctcttgcaaagtttcatgaagtcttcaaaaccctagctgaaagtgat
gaaggaaagttacatgttctaagagttatgtttgaggtctggaggaaccatccacagatg
attgctgtgctagtagataagatgattcgcactcagattgttgactgtgctgcagtagcg
aattggatcttctcttcagaattatctcgtgactttactagattgtttgtttgggaaatt
ttgcactccacaattcgtaagatgaacaaacacgttttgaagatccagaaagagctggaa
gaagctaaagaaaaactcgcaaggcaacacaaacggagaagcgacgacgacgacagaagc
agtgacagaaaagatggggctctggaggagcaaatagagaggctgcaggaaaaagtggaa
tctgctcagagtgaacaaaagaacctcttccttgtcatatttcagcggtttatcatgatc
ttgaccgagcacttagtacgatgtgagacggacgggaccagcgtgttaactccgtggtat
aagaactgtatagagaggcttcagcagatcttcttacagcatcaccaaatcatccagcag
tatatggtgaccctggagaacctgctcttcactgctgagttagaccctcatatcttggct
gtgttccagcagttctgtgccctgcaggcttaa
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integrated database retrieval system
