Pteronotus mesoamericanus (Parnell's mustached bat): 129079498
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Entry
129079498 CDS
T09558
Symbol
SHOC1
Name
(RefSeq) protein shortage in chiasmata 1 ortholog
KO
K28108
shortage in chiasmata 1
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppam03036
]
129079498 (SHOC1)
Chromosome and associated proteins [BR:
ppam03036
]
Eukaryotic type
Meiosis-specific proteins
Others
129079498 (SHOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5587
Motif
Other DBs
NCBI-GeneID:
129079498
NCBI-ProteinID:
XP_054440714
LinkDB
All DBs
Position
Unknown
AA seq
1480 aa
AA seq
DB search
MFSIFKYCAIDYLYENVIRKKFCRDALVLRIPSCLYQDGSYHAQVIDNKFRRPWTRVSAV
SVWGMTDSSVLDQWKASLNLEDFLEKKTVTGTVTQINCEFEEIVPSSNPNSQIEFEEASL
QAHKDYSEVFMPISCSEKWPAFQAQNRDLFIDHEDILFASNSMICKSHLPTLHTLLSRLK
LFLLEDPLLDFKEQIFTEVNFFRECFSFQGDLKDLMTEDFYMDKENFCQEKLEDIVGLNE
TLLLLPECEFIASTFKQEVNIPSLLELKESLNLMPEIINFEDENENLFKRDVITKHGIDI
EDMKCSSTEILAIQSQYEPERNKPEELEMPLSPLHLTNQHSSVNSLCTELQTFPFSPVCK
IAKNEESNNLYSVTDLKKIFSIEEKSLGVTPISPEWWKQAGLNLRVTGTLEHLTTYFCHH
DLSSDDTKMNIFLPIKVVQLETWLDHESCSSSNAFIDEDSTSNNLALLQKSPSLAKEVPD
LCFSDEYISAKSPTKEEKPKDDQELVYRIIQNKENKGCLEPDCTILSIGSPSSKIVKASF
KRGKKRENDLDLLNDFIMMRNKHKTCISNTEDTDSDEKDDKEEDSLTLQEESPIVCTNKT
LEKINQARGTDNVIEVQASESQCQAYCLLEAAATPILKKLGCLCPLPVANWKFATVIFDQ
TRFLLKEQEKLVSDATHQGTDDEREMAFKLAGLLHLLVTIRDILLTCSLDTALGYLSNAK
DEYKSILGSYLDDIWRQLEIVQFIRREKPETNYKIQELQCQILNWMQSEQQIKVLIIIRM
DSDGEKHLLIEILNKMEGLTLSVLHSNTRRDYMESEDVLDGTSSCVVVHNQYIGADFPWS
NFSFVVEYNHGENSCWTKHCEKLNIPFMAFKVILPDTVLKRSNLLDSFGGFLLDIQIPYV
FFASEGLLNTPEILQLLESNYNITLVERCCTESLKFFGGTECYVVVTVDEHTAIILQGLE
ELNYEKASDNIIMRLMALSFQYSCCWIILYARKTLNSEYYLTEKTLHHLALIYAALVSFG
LKSEELDVKLIIAPGVEETALTVRQIADHTLMTSKRDPHEWLDKSWLEVSPAKEEMYLLD
FPCINPLVAQLMLNKGPSLHWILLATLCQLQELLPEVPEKVLKHFCDITSLFKISPTSIT
TSPQISSPQENRNQTRNFLLQSSASDSSDSAIQEHNEYCQYSDLGETVQEDTNTTSNYNS
SLVEPREREMPCVLPPVTSYTQTGYWKDSSCNSNIVQNNPFLINMESRNSAGNYFLNQND
SQTDVFSLGLTQINCETRISPIDTQKRAAPNFINSQQKGTHEAKRPINKEVSTPIFSLEY
SQPPPPWNFKKNVWEQQNHSFNLQYGAEQTTCDKWYSQKDNVYSVQQKCPSDELEGFICE
SSNAGTQEALWKELPSVPSSNLFCASGSNIIQKEFNNLYVHQRGGMRLGQKRHAESSSNS
EDKKSLTEFLCSQLPQFKKRRLVYEKIPGRADGQTRLRFY
NT seq
4443 nt
NT seq
+upstream
nt +downstream
nt
atgttttcaatattcaaatattgtgcaatagactatttatatgagaatgtaattagaaag
aagttttgcagagatgctttagtgcttcgaatcccttcatgtttgtatcaagatggaagt
tatcatgcacaagttattgataataaatttaggaggccatggacaagagtgtcagctgtt
tcagtttggggaatgacagacagctcagtcctggatcaatggaaagccagcctcaatttg
gaggacttccttgagaagaaaacagtcacaggaacggtgactcagattaactgtgaattt
gaagaaattgttccaagttcaaacccaaactcccaaattgaattcgaggaagccagctta
caagctcataaggactacagtgaagtctttatgcctattagctgttcagaaaaatggcca
gcatttcaagcacagaaccgagatttgtttattgatcatgaagatatactttttgcaagt
aattcgatgatctgtaaaagtcatctaccaacattgcatactctgttgagtagactaaaa
ctgtttttgctggaagacccccttttagacttcaaagagcagatcttcacagaagttaat
tttttcagggaatgtttctcttttcaaggagatttgaaagatcttatgacagaagatttt
tacatggataaagagaacttttgtcaggagaagctagaagatatagtaggtttaaatgaa
actctattacttttacctgaatgtgaatttatagcttcaaccttcaaacaagaagttaat
attccatcacttttagaactgaaggagtcattaaacttaatgccagaaataataaatttt
gaagatgaaaatgaaaaccttttcaaaagagatgttattaccaagcatggaattgacatt
gaggatatgaaatgcagctccacagaaattttggccattcaaagccaatacgaaccagag
agaaataaaccagaagaattagaaatgccattatctcctctacacctaacaaaccaacat
tcttctgtgaattcattatgtacagaacttcagacatttccattttctcccgtttgtaaa
attgccaagaatgaagagtccaacaatctatattcagttacagatttgaaaaagatattt
tcaattgaagaaaaaagtcttggggttactcccataagcccagagtggtggaaacaagca
ggactaaatctgagagtgacaggaactctggaacatctgactacatatttctgtcatcat
gatttatcttctgatgatactaaaatgaatatatttttgcctataaaagtggttcaattg
gaaacatggctagatcatgaaagttgttcctcatctaatgcatttattgatgaggattct
acaagtaataatttagcattgctacagaaaagtccatctctggcaaaagaagtaccagac
ctatgtttttctgatgaatatatctctgctaaaagtccaacaaaagaagaaaaaccaaag
gatgatcaagaactagtttatagaataatccaaaataaagaaaataaaggttgcttggaa
cctgattgcacaatactatccattggatcaccttcttcaaaaattgtaaaagcttctttt
aaacgtggtaaaaaacgggaaaatgacttggaccttttgaacgactttattatgatgcga
aataaacataaaacttgcatctcaaacactgaagacacagatagtgatgaaaaagatgat
aaagaagaagattctttgactcttcaagaagaaagtcctattgtttgtactaataaaact
ctagagaaaataaatcaggcaagaggaacagataatgtcattgaggttcaagcatcagag
agccagtgccaagcatactgtctcctagaagcagcagctactcctatcttaaaaaaactt
ggatgcctctgtcctctccctgttgctaattggaaatttgccactgttatttttgaccaa
acaagattcctcttaaaggaacaagaaaaattagtaagtgatgctactcatcaaggtaca
gatgatgaaagagaaatggcattcaagcttgcaggcctcttacaccttctggtcacaatt
cgcgatatccttttaacatgtagcttggacacagcattgggatatttgtcaaatgcaaaa
gatgagtacaaaagcattttaggttcctatttggatgacatttggagacagctagaaatt
gtacagtttattaggagggaaaagcctgaaaccaactacaaaatacaagaattgcaatgt
cagatactaaattggatgcaaagtgaacagcaaattaaggtgctgattataatacgaatg
gactcagatggtgaaaaacatttactcattgaaatccttaacaaaatggaaggtttaaca
ttgagtgtcttacattcgaacacaagaagagattatatggaatctgaagatgttttagat
ggtacaagttcctgtgtagtagtacataatcagtatattggagcagacttcccctggagt
aatttctcatttgtggtggaatataatcacggagaaaactcttgttggactaaacactgt
gaaaaactgaatattccattcatggcctttaaagtgattcttccagacacagttttaaag
agaagcaacttgctggatagttttggtggttttcttttggatattcagattccatatgtg
ttttttgcatctgaaggacttcttaatactccagaaatacttcagttgctcgaatccaac
tataatatcacactagtggagagatgctgcactgagtcattgaaattctttggagggaca
gagtgttatgtagtagtgacagttgatgaacacactgccataattttgcagggcctagaa
gaactgaattatgaaaaggcatcagacaacatcattatgagactgatggcattatcattc
cagtatagctgttgttggataattttatatgccagaaaaacattaaattcagagtactat
cttacagaaaagacacttcatcacctggcactgatttatgcagctttagtttcatttggg
ctaaaatcagaagaactggatgtaaagcttataattgcccctggagtagaagagactgca
ttgacagttcgacaaattgctgaccacactttaatgacctcgaagagagatcctcatgag
tggctggataaatcttggcttgaagtttcaccagctaaggaagaaatgtatttacttgat
tttccatgtattaatccattggtggctcagctcatgttaaataaaggaccttctcttcac
tggatattgttagcaactctttgtcaacttcaggaactcctacctgaagttccagaaaaa
gtgttaaagcatttttgtgacatcacttccttattcaagattagtcctacttctataaca
acatcacctcaaatttcatcacctcaggaaaatagaaatcagactagaaacttccttctt
cagagttcagcttctgactcttcagattctgccattcaagaacataatgaatattgccag
tactcagacttaggagagacagtgcaggaagacacaaacaccacttcaaattataactct
tccctcgtggaaccaagggaaagagaaatgccatgcgttttaccacctgtgacttcttac
acacagaccggctattggaaagactccagttgtaactctaacatagtgcagaataatccc
tttctgattaatatggaatcaaggaactcagctggtaactactttctaaaccagaatgat
tcacagacagatgtcttttctttgggtctgacacaaataaattgtgaaaccagaatatca
ccaattgacactcagaagagagctgcccctaattttataaattctcagcaaaagggaaca
catgaagcaaaaagacctataaacaaggaagtatctacccctatcttttcattagaatac
tctcaacctcctcctccttggaactttaagaaaaatgtatgggaacaacagaatcactct
ttcaacttacagtatggtgcagagcagactacatgtgacaaatggtactctcagaaagat
aatgtatactctgttcagcaaaaatgtccatcagatgagttggaaggcttcatctgtgaa
agttcaaatgctgggactcaagaggctctctggaaagaattaccatctgttcctagttcg
aatttattttgtgcttctggttctaacattattcaaaaagaattcaacaatctttatgtc
catcaaagaggtggaatgcgtttaggacagaaaaggcacgctgaatcttcatctaactca
gaagacaagaaatcattaacagagttcctgtgctcacaactaccacaattcaaaaaacga
cgtctagtgtatgaaaaaatccctggtagagctgatggacagactcgtctgaggttttat
tga
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