Pteronotus mesoamericanus (Parnell's mustached bat): 129080188
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Entry
129080188 CDS
T09558
Symbol
SMG8
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG8
KO
K18734
protein SMG8
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppam03019
]
129080188 (SMG8)
Messenger RNA biogenesis [BR:
ppam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
129080188 (SMG8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg8_Smg9
Motif
Other DBs
NCBI-GeneID:
129080188
NCBI-ProteinID:
XP_054441467
LinkDB
All DBs
Position
Unknown
AA seq
990 aa
AA seq
DB search
MAGPVSLRELLMGASAWNNPESPEGSPAEGGGSVTSGPEPPWREDEICVVGIFGKTALRL
NSEKFSLVNTVCDRQVFPLFRHQDPGDPGPGIRTEADAVGEAGGAGDPGAGAADPVRGGV
VAAESNQTEAGSQDYSLLQAYYSQESKVLYLLLTSICDNSQLLRACRALQSGEAGGGLPL
PHAEAHEFWKHQEKLQCLSLLYLFSVCHILLLVHPTCSFDITYDRVFRALDGLRQKVLPL
LKTAIKDCPVGKDWKLNCRPCPPRLLFLFQLNGALKVEPPRNQDPAHPDKPKKHSPKRRL
QHALEDQIYRIFRKSRVLTNQSINCLFTVPANQAFVYIVSGSQEEDPVGMLLDQLRSHCT
VKDPESLLVPAPLSGPRRYQVMRQHSRQQLSFHVDSSSSSSSGQLVDFTLREFLWQHVEL
VLSKKGFDDSVGRNPQPSHFELPTYQKWISAASKLYEVAIDGKEEDMGSPTGELTSKILS
SIKVLEGFLDIDTKFSENRCQKALPMAHSAYQSNLPHNYTMTVHKNQLAQALRVYSQHAR
GPAFHKYAMQLHEDCYKFWSNGHQLCEERSLTDQHCVHKFHSLPKSGEKPEAERNPPVLY
HNSRARSTGACNCGRKQAPRDDPFDIKAANYDFYQLLEEKCCGKLDHINFPIFEPSTPDP
APAKNESSAPPDAEADRLKEKEPQTQGESTSLSLALSLGQSTDSLGTYPADPQAGGDNPE
VHGQGEVKTEKRPNLVDRQASTVEYLPGMLHSNCPKGLLPKFSSWSLVKLGPAKSYNFHT
GLDQQGFIPGTNYLMPWDIVIRTRAEDEGDLDTNSWPAPNKAIPGKRSAVVTGRGRRRDD
IARAFVGFEYEDSRGRRFMCSGPDKVMKVLGSGPKESALKALNSDMPLYILSSSQGRGLK
PHYAQLMRLFVVVPDAPLQIILMPQVQPGPPPCPVFYPEKQEITLPPDGLWVLRFPYAYV
TERGPCFPPKENVQLMSYKVLRGILKAVTQ
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtcctgtcagtttgagagagcttctaatgggagcgtcagcctggaacaaccct
gaaagtccggaggggtcccccgcagagggcggagggagcgtgactagcggaccggagcct
ccttggcgagaggatgagatctgcgtggtgggaatcttcggcaagacggctctgcgactg
aattccgagaagttctcacttgtgaacaccgtgtgcgacagacaggtctttccccttttt
cgccaccaagatcctggggacccagggcctggaatcaggaccgaggctgacgccgtcggg
gaggctggtggagccggggaccctggggctggggctgcggatccagttcggggaggtgta
gttgccgcggaaagtaaccaaactgaggcaggctcgcaggactacagccttttgcaggcc
tattacagtcaggaaagtaaagttctgtatcttcttctcacttccatctgtgacaattcc
cagcttctgcgggcctgtcgggcccttcagagcggggaagctggaggcggtctcccttta
cctcatgcagaagcgcacgagttctggaaacatcaagagaaactgcagtgcctcagtctc
ctttaccttttctccgtctgtcatatcctgcttttggtccatcccacttgttcctttgac
atcacttatgatcgagtattcagagccctggatggattgagacagaaagtactgcccctc
ctcaaaacagccattaaggattgtccagttggcaaagattggaaactaaactgccgacct
tgcccacctagactccttttcctctttcaactcaatggagcccttaaagtggaacctcct
cggaaccaagacccagctcatcctgacaagcccaagaagcattctcccaaaaggagactg
caacatgcccttgaggaccagatttatagaatcttccggaaaagtcgtgtcttgactaat
cagagtatcaactgcctctttactgtgcctgccaaccaagcttttgtgtacatagtttcg
ggaagccaggaggaggacccagtaggcatgttgctggaccaacttaggagtcattgtact
gtgaaggaccctgaatctctgctggtgcctgcacccctttctggtcccaggagataccag
gtgatgaggcaacacagccgacaacaactttctttccatgttgacagcagcagttccagt
tcttccggacagctggtggatttcactcttagggaattcctatggcagcatgtggagcta
gttctaagcaagaaaggttttgatgatagtgtgggcaggaacccacagccttcccatttt
gaactccccacgtaccagaagtggatctcagcagcttcaaaactgtatgaagtagctatt
gatgggaaagaggaggacatggggtctcccactggagagctaacatctaagattttaagc
agtattaaagtcttggaagggtttttggatattgacaccaaattctcagaaaaccggtgc
caaaaagctttacccatggcccatagtgcctatcagtcaaatttgcctcataattataca
atgactgtccataagaatcaacttgcccaggctctgcgagtatacagtcaacatgctagg
ggtccagcgtttcacaaatatgccatgcagttacacgaggactgctacaagttttggagc
aatggccatcagctctgtgaggagaggagtttaactgatcaacattgtgtacataaattt
cactcattacctaaatcaggagaaaaaccagaggctgaaagaaaccctcctgtgctctat
cacaatagcagagctcgatccactggtgcctgtaactgtggaaggaaacaagcacctcga
gatgatccctttgatatcaaggcagctaactatgacttttatcagcttctagaagaaaaa
tgttgtggaaaattggatcatatcaatttcccaatatttgaaccaagtactccagatcct
gcacctgccaaaaatgaatcttctgcccctccagacgcagaagctgacagacttaaagaa
aaagaacctcagacccaaggagagagcacaagcctgagcttagctttgagtttaggccaa
tccacggatagtttaggtacctatccagctgatccacaagcaggaggagataatccagaa
gttcatggtcaaggagaagtaaaaactgagaagagaccaaacttggttgatcgacaggca
tccacagttgagtatctcccaggcatgctgcattcaaattgccctaaaggcctcctgccc
aaattctcgagctggtctttggttaaactaggccctgctaagtcttataactttcataca
ggtttggaccaacagggcttcattccaggaacaaactatcttatgccttgggacattgtc
atcaggaccagggctgaagatgaaggagacttagacacaaattcttggcctgctccaaat
aaagctattcctggaaaaagaagtgcagttgtaacgggaagaggaagacggcgagatgac
atagcgcgagcatttgtgggctttgaatatgaagactctcgaggtcggaggtttatgtgc
tcaggacctgacaaagtgatgaaagtactgggaagtggaccaaaggaatcagctttaaaa
gccctgaatagtgatatgcctttatatattctatcatcatctcagggtagagggctaaaa
ccacattatgctcaacttatgaggctttttgttgtggttcctgatgctcctttgcagata
atactaatgcctcaggttcaaccaggcccaccaccgtgtccagtattctacccagaaaaa
caagaaatcactctcccaccagatggcctctgggttttgagatttccttatgcatatgtg
acagagagaggaccatgtttcccgccaaaggaaaatgtgcagctaatgagttacaaggtg
ctccgtggaattcttaaagcagttacacaataa
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