Pteronotus mesoamericanus (Parnell's mustached bat): 129082457
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Entry
129082457 CDS
T09558
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Pathway
ppam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129082457
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppam03019
]
129082457
03012 Translation factors [BR:
ppam03012
]
129082457
Enzymes [BR:
ppam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
129082457
Messenger RNA biogenesis [BR:
ppam03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
129082457
Translation factors [BR:
ppam03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
129082457
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
HA2_N
AAA_22
AAA_19
nSTAND3
AAA_14
PhoH
ATPase
NPHP3_N
ResIII
AAA_34
ATPaseInh_sub_z
AAA_23
KH_PARP14_5
RsgA_GTPase
ABC_tran
Motif
Other DBs
NCBI-GeneID:
129082457
NCBI-ProteinID:
XP_054444131
LinkDB
All DBs
Position
Unknown
AA seq
1007 aa
AA seq
DB search
MSYDYHQSWGRDGGPRSSGGGCGGSHGGGHGGNRGSGGGGGGGGGGRGGRGRHPGHLRGR
EIGLWYAKKQGQKNKEAERQERAVVHMDEHREEQIVQLLHSVQAKNDKDSESQISWFAPE
DHGYGTEAPAENKPNSEKKFEDQEKKLINQEKRTFRIRDKYIDRDSEYLLQENKPDVTLD
QQLLEDLQKKKTDPRYIEMQHFREKLPSFGMQKELVNMIDNNQVTVISGETGCGKTTQVT
QFILDNYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLP
RKQGSILYCTTGIILQWLQSDSHLSSVSHIVLDEIHERNLQSDVLMTVVKDLLSYRPDLK
VILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRYVPEQKEHRSQFKRS
FMQGHVNRQEKEEKEAIYKERWPDYIRELQKRYSASTVDVIKMVDDDKVDLNLIAALIRY
IVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKRTP
PGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKG
RAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAHFLSRLMDP
PSNEAVSLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTI
AASLSFKDPFVIPLGKEKVADARRKELAKDSKSDHLTVVNAFEGWEEARRRGFRYEKDYC
WEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPKSNINSDNEKIIKAVICAGLYP
KVAKIRLNLGKKRKMLKVYTKTDGLVAIHPKSVNVEQTDFHYNWLIYHLKMRTSSIYLYD
CTEVSPYCLLFFGGDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDTLLQEKI
ESPHPVDWKDTKSRDCAVLSAIIDLIKTQEKATPRNLPPRFQDGYYS
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgagctatgactaccatcagagctggggccgcgatggtgggccccgcagctccggtggg
ggctgtggaggaagtcatggagggggccatggagggaaccgaggctccggaggcggtggc
ggaggaggaggcggtggtcgaggaggccggggccgacatcccgggcacctgagaggccgc
gaaatcggcttgtggtacgcgaagaaacaggggcagaagaacaaggaagccgagaggcag
gagagagctgtagtacacatggatgaacatcgagaagaacaaattgtgcagctcctacat
tctgtccaagctaagaatgataaagattcagaatcacaaatatcctggtttgctccggaa
gatcatgggtatggtaccgaagctcctgctgagaacaaaccaaactcagagaagaaattt
gaggaccaggaaaaaaaattgataaatcaagaaaaaaggacatttagaatcagggacaaa
tatattgaccgagattctgagtatctcttgcaagaaaataaaccagatgtaactttagac
caacagttactggaagatttgcaaaagaaaaaaactgaccctcggtatattgaaatgcag
catttcagggaaaagctgccttcatttggaatgcaaaaggaattggtaaatatgatcgat
aataatcaggtgacagtaataagtggtgaaactggttgtggaaaaaccactcaagtaact
cagttcattttggataattacatcgaaagaggaaaaggatctgcgtgcaggatagtttgt
actcagccaagaagaattagtgccatttcagttgcagagagagtggctgcagaaagggca
gaatcttgtggcaatggtaatagtactggataccaaattcgtctgcagagccggctgcca
aggaaacagggttctatattatactgtacgacaggaatcatccttcagtggctccagtca
gactcgcatttgtccagtgttagtcatattgtgcttgatgaaatccatgagagaaatctg
cagtcagatgttttaatgactgttgttaaagaccttctaagttatcggcctgatctgaag
gtaatattgatgagtgcaacattgaatgctgagaaattttcagaatattttggtaactgt
ccaatgatacatatacctggttttacttttccggttgtggagtatcttttggaagatata
attgaaaaaataagatatgttccagaacaaaaagaacacagatcccagtttaagaggagt
ttcatgcaagggcatgtaaatagacaagaaaaagaagaaaaagaagcaatttataaagaa
cgctggccagattatataagggagctgcagaagaggtattctgcaagtactgtagatgtt
ataaaaatggtggatgatgataaagttgatctgaatttgattgctgcccttattcgatac
attgttttggaagaagaggatggtgcaatattggtcttccttccaggctgggacaatatc
agcactttacatgatctcttgatgtcacaagtgatgtttaaatcagacaagtttcttatt
atacctttacattcactgatgcctacagttaaccagacacaggtatttaaaagaacccct
cctggtgttcggaaaatagtaattgctacgaacattgcagagactagcataaccatagat
gatgtagtttatgtgatagatggaggaaaaataaaggagacacactttgacacccagaac
aacatcagcacaatgtctgctgagtgggtcagtaaagctaatgccaaacaaaggaaaggt
cgagctggaagagttcagcctggccattgctatcatctgtataatggtcttcgagcaagc
cttctagatgactatcaactgccagagatcttgagaactcctctggaagaactttgttta
caaataaagatcttaaggcttggcggaatcgctcattttctgagtaggttaatggatcca
ccatcaaatgaagcggtgtcactctccataaagcacctgatggaactgaatgctctggat
aaacaagaagaattgacacctcttggagtccatttagcacgattaccagttgagccacac
attggaaagatgattctttttggggctctgttctgttgtttagacccagtacttaccatc
gctgcgagtctcagcttcaaggatccctttgtgatcccattggggaaagaaaaggtcgca
gatgcaagaagaaaggaattggcaaaggattctaaaagtgaccacctgacagttgtgaat
gcatttgagggatgggaagaagctagacgacgtggtttcagatatgaaaaagactattgc
tgggagtattttctgtcttcaaatacgttgcagatgctgcataacatgaaagggcagttt
gctgagcatcttcttggagctggatttgtaagcagtagaaatcccaaagatccgaaatct
aatataaattcagataatgagaagataattaaagctgtcatctgtgctggtttatatccc
aaagttgctaaaattcgactaaatttgggtaaaaaaagaaaaatgttgaaagtttacaca
aaaactgatggactggttgctattcaccctaagtctgttaatgtggagcaaacagatttt
cactataactggcttatctatcacctaaagatgagaacaagtagtatatacttgtatgac
tgcacagaagtttccccatactgtctcttgttctttggaggcgatatttccatccagaag
gataatgatcaggaaactattgctgttgatgagtggattgtctttcagtctccagccaga
attgcccatcttgttaaggaattaaggaaggaattagatacccttctgcaagagaagatc
gaaagtccccatcctgttgactggaaggacacgaaatccagagactgtgcagtcctctca
gccatcatagacttgatcaaaacacaggaaaaagccactcccaggaacttgccgccacga
ttccaggatggatattatagctga
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