Pteronotus mesoamericanus (Parnell's mustached bat): 129082871
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Entry
129082871 CDS
T09558
Symbol
SYMPK
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Pathway
ppam03015
mRNA surveillance pathway
ppam04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129082871 (SYMPK)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
129082871 (SYMPK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppam03021
]
129082871 (SYMPK)
03019 Messenger RNA biogenesis [BR:
ppam03019
]
129082871 (SYMPK)
Transcription machinery [BR:
ppam03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
129082871 (SYMPK)
Messenger RNA biogenesis [BR:
ppam03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
129082871 (SYMPK)
U7-dependent histone pre-mRNA processing factors
129082871 (SYMPK)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
PDS5
Cnd1
Cohesin_HEAT
Motif
Other DBs
NCBI-GeneID:
129082871
NCBI-ProteinID:
XP_054444604
LinkDB
All DBs
Position
Unknown
AA seq
1273 aa
AA seq
DB search
MAGSSGDSVTRRSVASQFFTQEEGLGIDVMTTSERVVDLLNQAALITSDSKITVLKQVQE
LIINKDPTLLDNFLDEIIAFQVDKSIEVRKFVIGFIEEACKRDIELLLKLIANLNMLLRD
ENVNVVKKAILTMTQLYKVALQWMVKSRAISELQEACWDMVSAMAGDIILMLDSDNDGVR
THAIKFVEAFIVTLSPRMADSEVPRRHEHDISLDRVPRDHPYIQYNVLWEEGKAALEQLL
KFMVHPAISSINLTTALGSLANIARQRPMFMSEVIQAYETLHANLPPTLAKSQVSSVRKN
LKLHLLSVLKHPASLEFQAQITTLLVDLGTPQAEIARNMPNSKDARKRPRDDSDSSLKKM
KLEPNLGEDDEDKDLEPGPSGTSKASAQISGQSDTDITAEFLQPLLTPDNVANLVLISMV
YLPETMPASFQAIYTPVESAGTEAQIKHLARLMATQMTAAGLGPGVEQTKQSKEEPKEEK
VAKPESVLIKRRLSAQGQAISVVGSLSSMSTLEEEAPQAKRRPEPIIPVTQPRLAGAGGR
KKIFRLSDVLKPLTDAQVEAMKLGAVKRILRAEKAVACSGAAQARIKILASLVTQFDSGL
KAEVLSFILEDVRARLDLAFAWLYQEYNAYLAAGASGTLDKYEDCLIRLLSGLQEKPDQK
DGIFTKVVLEAPLITESALEVIRKYCEDESRTYLGMSTLRDLIFKRPSRQFQYLHVLLDL
SSHEKDKVRSQALLFIKRMYEKEQLREYVEKFALNYLQLLVHPNPPSVLFGADKDTEVAA
PWTDETVKQCLYLYLALLPQNHKLIHELAAVYTEAIADIKRTVLRVIEQPIRGMGMNSPE
LLLLVENCPKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLIPVLNGLEK
KEVIQALPKLIKLNPIVVKEVFNRLLGTQHGEGNSALSPLNPGELLIALHNIDSAKCDMK
SIIKATNLCFAERNVYTSEVLAVVMQQLMEQSPLPMLLMRTVIQSLTMYPRLGGFVMNIL
SRLIMKQVWKYPKVWEGFIKCCQRTKPQSFQVILQLPPQQLGAVFDKCPELREPLLAHVR
SFTPHQQAHIPNSIMTILEASGKQEPEAKETPAGPPEEDDLEPLALAPAPAPRPPQDLIG
LRLAQEKALKRQLEEEQKLKPGGVGAPPPSASASARPGPPQPEEAMDFREEGPECETPAI
FISMDDDSGLTEAALLDSSLEGPLPKEAAAGGLTAKEERSPQTLTPAGEDAVKTPSPAAV
AEEAGEPETKGNS
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcagcagtggggacagcgtcactcgccggagtgtggcgtcacagtttttcaca
caagaggaggggctgggcattgacgtcatgaccacctcagagagagtggtggacctcctg
aaccaggctgcgctgatcaccagcgattcaaagatcacagtgctcaaacaggtccaggag
ctgatcatcaacaaggatcccacgctgctggacaacttcctggatgagatcatcgctttc
caagtagacaagtcaattgaagtgcgcaaatttgtcatcggcttcatcgaggaggcatgc
aagcgagacatcgagttactgctaaaactgattgcgaacctcaacatgctcttgagggac
gagaatgtgaacgtggtgaagaaggccatcctcaccatgacccagctctacaaggtggcc
ctgcagtggatggtgaagtcacgggccatcagcgagctccaggaggcctgctgggacatg
gtgtctgccatggctggggacatcattctcatgttggactctgacaacgacggtgtccgc
acccacgccatcaagtttgtggaggccttcattgtcaccctgtcaccccgcatggctgac
tcggaggtgccccgacgccatgagcacgatatcagcctggaccgcgtcccgcgtgaccac
ccctacatccaatacaatgtgctgtgggaagagggcaaggcagccttggagcagctcctc
aagttcatggtgcaccccgccatctcttccatcaacctgactacggcactgggctccctg
gccaatatcgcccgccagaggcccatgttcatgtctgaggtgattcaggcctatgaaacc
ctgcacgccaacttgcccccgacgctggccaaatctcaggtgagcagcgttcgcaagaac
ctcaagctgcacctgttgagtgtgctgaagcacccagcttccttggagttccaggcccag
atcaccaccctgctggtggacctgggcaccccgcaggccgagatcgcccgcaacatgccc
aacagcaaggatgcccgaaagcggccccgagacgactcggattcctcgctcaagaagatg
aagctagagcccaacctgggggaagatgacgaggacaaggacttggagccaggcccgtcg
gggacctcgaaggcctcagcccagatctcaggccagtcagacacagacatcacagctgaa
ttcctgcagcctctgctgacgcctgacaacgtggccaacctggtcctcatcagcatggtg
tacctgcccgagaccatgcctgcctccttccaagccatctacaccccagtggagtccgcg
ggcaccgaggcccagatcaagcacctggctcggctcatggccacgcagatgacggccgcg
gggctggggccaggtgtggagcagaccaaacagtccaaggaggagcccaaggaggagaag
gtggcgaagcctgagagcgtcctgatcaagcgacgcctgtcggcccagggccaggccatc
tcggtggtgggctccctgagctccatgtccacgctggaggaggaggccccccaggccaag
agaaggccagagcccatcatccctgtcacgcagccccggctggcgggtgccggaggacgc
aagaaaatcttccgcctgagcgatgtcctgaagcccctgacggacgcccaggtggaggcc
atgaaactgggcgctgtgaagcggatcctgcgggctgagaaggcggtggcctgcagcggg
gcggctcaggcgcgcataaagatcctggccagcctggtgacgcagttcgattcaggcctg
aaggctgaggtcctgtccttcatcctggaggacgtgcgggcccgcctggacctggccttc
gcctggctctaccaggagtacaacgcctacctcgcagccggcgcctcgggcaccctggac
aagtatgaagactgcctcatccgcctgctctccggcctgcaggagaagccagaccagaaa
gatgggatcttcaccaaggtggtgctggaggcaccgctgatcacggagagtgccctggag
gtgattcgcaagtactgcgaggacgagagtcgcacctacctgggcatgtccacccttcga
gacctgatcttcaagcgcccgtcccgccagttccagtacctgcacgtcctactagacctc
agctcccacgagaaggacaaggtgcgttcccaggccctgctcttcatcaagcgcatgtat
gagaaggaacaactgcgagagtacgtggagaaatttgccctcaactacctgcagctcttg
gtccaccccaacccgccatcggtgctgtttggagccgacaaggacacagaggtggcagcg
ccctggaccgatgagaccgtaaagcagtgtctgtacctctacctggctctcctacctcag
aaccacaagctgatccacgaactggcagctgtgtacactgaggctatcgctgacatcaag
cggacggtgctcagggtcatcgaacagccgatccgaggaatgggcatgaactctccagag
ctgctgctcctggtggaaaactgtcccaagggggcagagacactggtcacaagatgtctg
cacagcctcacagataaagtcccgccctccccggagctggtgaagcgggtccgcgatctc
taccacaagcggctgccagacgtccgcttcctcatccccgtgctcaacgggctggagaag
aaagaagtgatccaggccttgcccaaactcatcaagctcaaccccattgtggtgaaagag
gttttcaaccgcctgctgggcacccagcatggtgaagggaactcggccttgtcccccctg
aaccctggagagcttctgattgcattacacaacatcgactcagcgaagtgtgacatgaag
tccatcatcaaagccaccaacctgtgctttgcggagcggaacgtgtacacatcggaggtg
ctggccgtggtgatgcagcagctgatggagcagagtcccctgcccatgctgctcatgagg
accgtcatccagtccctgaccatgtacccccgcctggggggcttcgtcatgaacatcctg
tcccgcctcatcatgaagcaggtgtggaagtaccccaaggtgtgggagggcttcatcaag
tgctgccagcgcaccaagccccagagcttccaggtcatcctgcagctgccgccccagcag
ctgggcgctgtctttgacaagtgcccagagctccgggagcccctgctggcccatgtccgc
tccttcaccccccatcagcaagcacacatccccaactccatcatgaccatcctggaggcc
agtggcaagcaggagccggaggccaaggagacccccgcagggcccccagaagaggatgac
ctggagcccctggcgctggctccggcccccgccccccggccccctcaggacctcatcggc
ctacggctggcccaagagaaggccttaaagcggcagctggaggaggaacagaagctgaaa
cctgggggagtgggagcccccccgccttcggcctcggcctctgccaggccgggcccccca
cagccagaggaagccatggatttccgggaggaggggcctgagtgtgagactcctgccatc
ttcatcagcatggatgacgactcggggctgaccgaggccgctctgctggactcgagtctt
gaggggcccctgccgaaggaggcagcagcgggcgggttgacggcgaaggaggagcggagc
ccccagaccctcacccctgctggagaagacgccgtgaagactcccagcccggccgccgtc
gcagaggaagccggggagcccgagaccaaggggaacagctga
DBGET
integrated database retrieval system
