KEGG   Pteronotus mesoamericanus (Parnell's mustached bat): 129083436
Entry
129083436         CDS       T09558                                 
Symbol
POLR2J
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11-a
  KO
K03008  DNA-directed RNA polymerase II subunit RPB11
Organism
ppam  Pteronotus mesoamericanus (Parnell's mustached bat)
Pathway
ppam03020  RNA polymerase
ppam03420  Nucleotide excision repair
ppam05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:ppam00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    129083436 (POLR2J)
  09124 Replication and repair
   03420 Nucleotide excision repair
    129083436 (POLR2J)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    129083436 (POLR2J)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ppam03021]
    129083436 (POLR2J)
   03400 DNA repair and recombination proteins [BR:ppam03400]
    129083436 (POLR2J)
Transcription machinery [BR:ppam03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     129083436 (POLR2J)
DNA repair and recombination proteins [BR:ppam03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      129083436 (POLR2J)
SSDB
Motif
Pfam: RNA_pol_L_2 RNA_pol_L SHNi-TPR
Other DBs
NCBI-GeneID: 129083436
NCBI-ProteinID: XP_054445244
LinkDB
Position
Unknown
AA seq 117 aa
MNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAG
YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAIKDKQEGIE
NT seq 354 nt   +upstreamnt  +downstreamnt
atgaacgcccctcctgccttcgagtcgttcttgttgttcgaaggcgagaagaagatcacc
attaacaaggacaccaaggtacccaatgcctgtttgtttaccatcaacaaagaagatcat
acactaggaaacattattaaatcacagctgctgaaggacccacaggtgctgtttgctggc
tacaaagttccccaccccttggaacacaagatcatcatccgtgtacagaccacaccagac
tacagcccccaggaggccttcaccaatgccatcacagacctcattagcgagctttccctg
ctggaagagcgattccgggtggccatcaaagacaagcaagaaggaatcgaatag

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