KEGG   Pteronotus mesoamericanus (Parnell's mustached bat): 129083628
Entry
129083628         CDS       T09558                                 
Symbol
THOC6
Name
(RefSeq) THO complex subunit 6 homolog isoform X1
  KO
K13175  THO complex subunit 6
Organism
ppam  Pteronotus mesoamericanus (Parnell's mustached bat)
Pathway
ppam03013  Nucleocytoplasmic transport
ppam03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ppam00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129083628 (THOC6)
  09122 Translation
   03013 Nucleocytoplasmic transport
    129083628 (THOC6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppam03019]
    129083628 (THOC6)
   03041 Spliceosome [BR:ppam03041]
    129083628 (THOC6)
Messenger RNA biogenesis [BR:ppam03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     129083628 (THOC6)
Spliceosome [BR:ppam03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    129083628 (THOC6)
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st Beta-prop_IFT122_1st Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_WDR5 WD40_Prp19 Beta-prop_NOL10_N WDR55 WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_EML WD40_Gbeta NBCH_WD40 Beta-prop_EML_2 Beta-prop_IP5PC_F Beta-prop_CAF1B_HIR1 WDR54 WD40_MABP1-WDR62_2nd ASA1 EIF3I Beta-prop_WDR36-Utp21_1st TRM82_WD Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_RIG_2nd DSE1_N Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_SCAP TIG
Other DBs
NCBI-GeneID: 129083628
NCBI-ProteinID: XP_054445448
LinkDB
Position
Unknown
AA seq 367 aa
MERAVPHTVPLGQMEVFQALQRLHMTIFSQSVSPCGKFLASGNNYGQIAIFSLSAALSSE
AKEESKKPIVTFQAHDGPVYSMVSTDRLLFSAGDGEVKAWLWVEILKKGCKELWRRQPPY
RTSLEVPEINALLLVPKENSLILAGGDCQLHTMDLETGTFTQALRGHTDYIHCLALRERN
PEVLSGGEDGAVRLWDLRMAKEVQTIEVYKHEECSRPHNGRWIGCLATDSDWMVCGGGPA
LTLWHLRSSTPTTIFPMWAPQKHVTFYQDLILSAGQGPCVNQWQLSGELKAQVPGSSPGL
LSLSLNQQPAAPECKVGLTRSYGRPGKPSVWASQSLFSCFQVLTAAGSSCRVDVFTNLGY
RAFSLSF
NT seq 1104 nt   +upstreamnt  +downstreamnt
atggaacgagctgtgccgcacactgtgcctctgggtcagatggaagtgtttcaggccctg
cagcggctgcacatgaccattttctcccagagtgtttcaccctgcgggaagttcctggca
tctggcaacaattatgggcagatagccatcttcagcttgtctgctgctttgagctccgag
gccaaagaggaaagtaagaaacccatagtgaccttccaagcccatgatgggcccgtctac
agcatggtctccaccgatcgacttctgttcagtgctggagacggggaggtgaaggcctgg
ctttgggtggagatcctcaagaagggatgtaaggagctatggcgtcgtcagcccccatac
aggaccagcctggaagtgcctgagatcaatgctttgcttctcgtccccaaggagaattcc
ctcatcttggcagggggagactgccagttgcatacaatggacctagagacggggaccttc
acgcaggccctccggggccacacagactacatccactgcctggcactgcgggagcggaac
cctgaggtgctgtcaggtggtgaagacggggctgtgcggctttgggacctccgcatggcc
aaggaggtccagacaatcgaggtctacaagcatgaggagtgctcaaggccccacaatgga
cgctggattggatgtttggcaactgactcagactggatggtctgtggagggggcccagca
ctcaccctgtggcacctccgatcctccacgcccaccaccatcttccccatgtgggcacca
caaaagcatgtcaccttctaccaggacctgattctgtcagctggccagggcccctgtgtc
aaccagtggcagctgagtggggagctgaaggctcaggtgcctggttcctccccagggctg
ctcagcctcagcctcaaccagcagccagcagcacctgagtgcaaggtgggtcttacaagg
agctatggccgtcctgggaagccaagcgtgtgggcaagtcagtcactcttctcttgcttc
caggtgctgacagctgcaggtagcagctgccgggtggatgtgttcaccaatctgggctac
cgtgccttctccctgtctttctga

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