Pteronotus mesoamericanus (Parnell's mustached bat): 129083781
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Entry
129083781 CDS
T09558
Symbol
TRIM50
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM50
KO
K12024
tripartite motif-containing protein 50/73/74
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppam04121
]
129083781 (TRIM50)
Ubiquitin system [BR:
ppam04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
129083781 (TRIM50)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-B_box
zf-C3HC4_4
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
zf-RING_2
RING_XB3-XBAT31
zf-RING_5
TRIM_CC
zf-Nse
Prok-RING_4
U-box
CC_BshC
Trimer_CC
Relaxase_C
SSNA1
Ninein_long_CC
COG2_N
zf-RING_6
DUF7575
Motif
Other DBs
NCBI-GeneID:
129083781
NCBI-ProteinID:
XP_054445712
LinkDB
All DBs
Position
Unknown
AA seq
535 aa
AA seq
DB search
MGNRPKILGIQDWNPGLESIRPSNFEAISRGLEAGSGSRPVLQPAPWMAAWQVSMTELED
RLQCPICLEVFKEPLMLQCGHSYCKGCLVSLSCHLDSELRCPVCRQEVDGSSSPPNVSLA
RVIEALRLPGDPEPNVCVHHRNPLSLFCEKDQELICGLCGLLGSHQHHRITPVSTVFSRM
KEELAALISDLKQEQKKVDEHIAKLVNNRTRIVNESDVFSRVIRREFQELHHLVEEEKAR
CLEGVEGHTRGLVASLDMQLEQAQGTRERLVQAKCVLEQFGNENHHEFIRKYHSMASRAE
LQQARPLESTFSPISFKPGLHQADIKLTVWKRLFRKVLPAPESLKLDPATAHPLLELSKG
NTVVQCGLLPQQRASQPERFDYSTCVLASRGFSCGRHYWEVVVGSKSDWRLGVIKGTASR
KGKLSKSPEHGIWLIGLKEGRVYEAFGCPRVPLPVAGHPHRIGIYLHYEQGELTFFDADR
PDDLRLLYTFQADFQGKLYPILDTCWHERSSNSLPMVLPPPSGPSHLTPAQPTKL
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacaggcccaagatcttagggattcaggactggaatccaggactggagtctata
aggccctctaatttcgaggccatttccagggggttggaggcaggctcaggaagtcgccct
gtgttacagcctgcaccgtggatggcggcgtggcaggtgagcatgaccgagctggaggac
cgacttcagtgccccatctgccttgaggtcttcaaggagcccctaatgctgcagtgcggc
cactcctactgcaaaggttgtctggtgtccctgtcctgccacctggactctgagctgcgt
tgcccagtgtgccggcaggaggtggatggcagcagctccccgcccaacgtgtccctggcg
cgggtgatcgaagccctgcggcttcctggggacccggagcctaacgtctgcgtgcaccac
cggaacccgctcagcctcttttgcgaaaaggaccaggagctcatctgcggcctctgcggc
ctgctgggctcccaccagcaccaccggatcactcccgtctccaccgtcttcagtcgcatg
aaggaggagcttgcggccctcatctctgacctgaagcaggaacaaaagaaggtggatgag
catatcgccaagctggtgaacaacaggacccggattgtcaacgagtctgatgtcttcagc
cgggtgatccgccgggagttccaggaactgcaccacctggtggaggaggagaaggcacgc
tgtctagaaggggtggaaggtcacacccgtggcctcgtggcctccctggatatgcagctg
gagcaagcccagggcacacgggagcggctggtgcaagccaagtgtgtgctggagcagttt
ggtaatgaaaatcaccacgagttcatccggaagtaccattccatggcctccagagcagag
ctccagcaggcccgacctctggaaagcacattcagccccatctccttcaagccaggtctc
caccaggctgacatcaagctgactgtgtggaaaaggctcttccgcaaggttctgccagcc
ccggagtctctcaagctggatcctgccacagcccatcctctcctggagctctccaagggc
aacacagtggtgcagtgtgggctcctgccccagcaacgggccagccagcctgagcgcttc
gactacagtacttgtgtcctggcaagccggggcttctcctgtggccgccactactgggaa
gtggtggtgggcagcaagagcgactggcgcctgggggtcatcaaaggcacagccagtcgc
aagggcaagctgagcaagtccccagagcatggcatatggctcattggcttgaaggagggc
cgggtgtatgaggcttttggctgcccaagggtgcccctgcctgtggctggacacccccac
cgcattggcatctatttgcattatgagcagggagagctcacgttcttcgatgctgaccgc
cctgatgacctgcggctgctctacacattccaggctgacttccagggcaagctctacccc
atcctggacacatgctggcatgaaaggagcagcaactcactgcccatggtgttaccaccg
cccagtgggcccagccacctcacccctgcacagcccaccaagctgtag
DBGET
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