Pteronotus mesoamericanus (Parnell's mustached bat): 129083904
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Entry
129083904 CDS
T09558
Symbol
YTHDC2
Name
(RefSeq) 3'-5' RNA helicase YTHDC2
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppam03041
]
129083904 (YTHDC2)
Enzymes [BR:
ppam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
129083904 (YTHDC2)
Spliceosome [BR:
ppam03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
129083904 (YTHDC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
HA2_C
OB_NTP_bind
Helicase_C
R3H
DEAD
Ank_2
HA2_N
AAA_19
nSTAND3
AAA_22
Ank
ATPase
PhoH
AAA_7
Ank_4
AAA_16
UvrD-helicase
AAA_29
T2SSE
ABC_tran
SRP54
AAA_23
Motif
Other DBs
NCBI-GeneID:
129083904
NCBI-ProteinID:
XP_054445931
LinkDB
All DBs
Position
Unknown
AA seq
1427 aa
AA seq
DB search
MSRPSSVSPRPPAGGGGGGGPAQCGPGGRARARGLKDVRIDEEVKIAVNIALERFRYGDQ
KEMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYLTVKKKDGSETAHAMMTCNLTH
NTKHAVRSLIQRFPVTNKERTELLPKTERGNVFAVEAENREMSKTSGRLNNGIPQIPVKR
GESEFDSFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPC
RIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLM
AGDSTLSAVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFG
SCPVIYIQGRPFEVKEMFLEDILRTTGYTNKEMLKYKKEKQREEKQQTTLTEWYSAQENS
LKSESQRQRTVPNVTEEYDLLDDGGDAAFSQLTEKDVNCLEPWLIKEMDACLSDIWLHKD
VEAFAQVFHLILTENVSVDYRHSETSATALMVAAGRGFSSQVEQLISMGANVHCKASNGW
MALDWAKHFGQTEIVDLLESYSASLEFGNLDESSLVQKSGSDLSVEDRELLKAYHHSFDD
EKVDLDLIMHLLYNICHSCDAGAILIFLPGYDEIVGLRDRILFDDKRFADNIHRYQVFML
HSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVT
MLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTK
LLAPINCPIADFLMKAPEPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHL
GKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGTFSDHMALL
RAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDV
NTNSENWAVVKAALVAGMYPNLVHVDRENLVLTGPKEKKVRFHPTSVLSQPQYKKIPPAN
GQAAAIQALPTDWLIYDEMTRAHRIANIRCCSVVTPVTVLVFCGPARLASNALQESSSFR
ADGIPIDSSDSEMEDRTTANLATLKLDEWLNFRLEPEAASLLLQLRQKWHSLFLRRMRAP
SKPWSQVDEATIRAIIAVLSTEEQSAGLQQPSGIGQRPRPMSSEELPLASSWRSNNSRKT
SADTEFSDESATAERVLMKSPSPALHPPQKYKDRGILHPKRSTDDRSDQSSVKSTEDYPS
PCASPSPPSSGKGSKSPSPRPNMPIRYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRA
FWESSVVYLVFSVQGSGHFQGFSRMSSEIGREKSQDWGSAGLGGVFKVEWIRKESLPFQL
AHHLLNPWNDNKKVQISRDGQELEPQIGEQLLQLWERLPTGEKTTTD
NT seq
4284 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggcctagcagcgtctccccgcggccgccggctggcggcggcggcggtggcggc
ccggctcagtgtggccctgggggccgcgcccgggccagggggctaaaggacgtgcgtata
gacgaggaggtgaagatcgcagtcaatatcgctctggagcgcttccgatatggggaccag
aaagaaatggaatttccttcttctttgaccagtactgaaagagcctttattcatcgattg
agtcagtctcttggtttggtctctaaaagtaaaggaaagggagcaaatagatacctaact
gtgaagaagaaagatggatcagaaacagctcatgcaatgatgacctgtaatttgactcat
aatacaaaacatgctgttaggagcctaattcaaagatttcctgtcaccaataaagaacgt
actgaacttctgcctaaaactgaaagaggaaatgtgtttgcagttgaagctgaaaaccgg
gaaatgagtaagacaagtgggcgactcaacaatggcatacctcagattccagtgaaaaga
ggagaatccgaatttgattctttcaggcagtctctgccagtgtttgagaaacaagaagaa
attgttaaaataattaaggaaaataaagttgttttgattgtaggagaaactggatctgga
aagactacacagattcctcagttcctattagatgattgctttaaaaacggcatcccctgc
cgtatattttgtactcaaccaagaagattagcagcgattgctgtggctgaaagagttgct
gcagagagaagagaaaggattggtcaaacaattgggtatcagatacgattagaaagcagg
gtttctccaaagacacttctgacattttgcactaatggggtattgcttcgtacattgatg
gcaggagatagtaccttgtcagctgtgacacatgttattgtggatgaagtacatgaaagg
gatcgatttagtgattttttacttacaaagttaagagatttgttgcaaaagcacccaact
ttgaaactaattctttctagtgctgccttggatgtaaatctctttataagatattttgga
agttgtccagtgatatatatacagggaagaccatttgaagtaaaagaaatgtttctggaa
gatattttaagaactactggatatacaaacaaagaaatgttaaaatacaaaaaagaaaaa
cagcgagaagagaaacagcaaaccacactcacagagtggtattcagctcaagagaattct
ttgaagtctgaatctcagaggcagagaactgttccaaatgtgactgaagagtatgattta
ttggatgatggtggtgatgctgctttcagtcagctgacagaaaaagatgtgaattgcctt
gaaccatggttaataaaggaaatggatgcttgtctttctgacatatggctgcataaagat
gttgaggcctttgctcaggttttccaccttattttaacagaaaatgttagtgttgactac
agacatagtgaaaccagtgcaacagctctgatggttgctgcaggacgaggtttttcaagt
caagtagagcagttaattagtatgggagccaatgtccattgcaaagcatcaaatggctgg
atggctttagattgggctaaacactttgggcagactgaaattgtggatcttttagaatct
tacagtgcttcattggaatttggaaatctagatgaaagttctctggttcaaaaaagtgga
agtgacctcagtgtggaagatagagagctcctgaaagcttatcatcatagttttgatgat
gaaaaagtagacttggatttgatcatgcatcttctatacaatatctgccatagttgtgat
gctggtgcaatattaattttcctacctggatatgatgaaattgttgggctgagggatcgc
atcctatttgatgacaagcggtttgctgacaatatacatagataccaagtgtttatgctt
cattcaaatatgcaaacatctgatcaaaagaaagtattaaaaaacccacctgcaggtgtt
cgaaaaataatcctttccaccaatattgctgaaaccagcatcacagtcaatgatgtcgtc
tttgttattgattctggtaaagtgaaagagaaatcctttgatgcgctgaattttgttaca
atgttaaaaatggtgtggatttccaaagctagtgcaatacaacggaaaggcagggcaggg
cgatgtagacctggaatttgtttccgtctgttcagtagactccgattccagaatatgttg
gaatttcagactccagaacttttgagaatgccattacaggaactttgtttacataccaag
ctgttagcccccattaattgtcctatagctgatttccttatgaaagctccagaacctcca
ccagctttaattgtaagaaatgctgtacaaatgcttaagacgatagatgcaatggatgca
tgggaagatctcactgaacttgggtatcatttggctgacttgccagtagaaccacatctt
ggtaaaatggtcctgtgtgctgttgttttaaagtgtctggaccccatccttactattgcc
tgcacactggcctatcgagatccttttgtcctgccaacccaggcctctcaaaaacgtgca
gctatgctttgtaggaaacgttttactgcaggaactttcagtgatcatatggcacttctc
agagcattccaggcatggcagaaagcacgaagcgatgggtgggagagagccttttgtgaa
aagaattttctttcacaagctaccatggaaataataataggcatgagaactcaattgctt
ggtcaacttagagcatcaggttttgttagagcacgaggtggtggtgacattcgagatgtt
aatacaaattctgagaactgggctgtcgttaaagctgcactggtggcaggcatgtatcct
aacttagtccatgtggacagagagaatttagtgttgacagggccaaaggagaaaaaagta
cgatttcatcccacatcagttctcagtcagcctcaatataaaaagattcctccagccaat
ggtcaagcagcagcaattcaggcactgcccacagattggcttatttatgatgaaatgacc
agagcccatagaatagctaatatcagatgttgttcagtagtgacacctgtcactgtgttg
gttttctgtggaccagctaggttggcaagtaatgctcttcaggaatcttcatcctttcga
gcagatggtattcctattgacagtagtgatagtgaaatggaggatagaactactgctaat
ttggcaactttgaaacttgatgagtggctgaatttcagactagagcctgaggctgccagt
ttattgctgcagctcagacagaagtggcacagcttatttttacgacgaatgagagctcca
tctaaaccttggtctcaagttgatgaagctaccattagagcaattatagctgttttaagc
actgaggaacagtctgcaggtttacagcaaccatctgggattggccaaaggccaaggcct
atgtcttcagaagaacttcctttggcatcatcttggaggtcaaataatagtaggaaaact
tcagcagatactgaattttctgatgagtctgctactgcagaaagagtattgatgaaatct
ccatctccagcattacacccgcctcagaagtacaaagatagaggaattttacaccccaaa
cgaagcactgatgaccgatcagatcagtcttctgtgaagtctacagaagattacccaagt
ccctgtgctagcccttctcctccttcctcaggaaaggggtcaaaatcaccttcaccaaga
ccaaacatgccaattcgatacttcataatgaagagtagcaatttgagaaaccttgaaatt
tctcaacagaagggtatttggtctacaacccctagtaatgagcggaagctaaatcgagcc
ttttgggaaagcagcgtggtttacttggtattttctgttcaaggatctggacatttccag
ggattttcaaggatgtcttctgagataggacgggagaagagccaggactggggctccgct
gggctaggaggagtgtttaaggtggagtggatacgaaaagaaagtcttccctttcagtta
gcacaccatttactcaatccttggaatgataacaagaaagtccaaataagcagagatggg
caggaactagaacctcagattggggagcagttgttacagttatgggaacgccttccaacg
ggagaaaaaaccacaactgattga
DBGET
integrated database retrieval system
