Pteronotus mesoamericanus (Parnell's mustached bat): 129083937
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Entry
129083937 CDS
T09558
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppam03021
]
129083937 (CHD1)
03036 Chromosome and associated proteins [BR:
ppam03036
]
129083937 (CHD1)
Transcription machinery [BR:
ppam03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
129083937 (CHD1)
Chromosome and associated proteins [BR:
ppam03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
129083937 (CHD1)
SLIK complex
129083937 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
Motif
Other DBs
NCBI-GeneID:
129083937
NCBI-ProteinID:
XP_054446000
LinkDB
All DBs
Position
Unknown
AA seq
1813 aa
AA seq
DB search
MNGHSDEESVRNSSGESSQSDDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSDSGSESGS
QSESESDTSRENKVQAKTPKVDGAEFWKSSPSILAVQRSAMLKKQQQQQQQQQQQQQQQQ
QQQQQHQASSNSGSEEDSSSSEDSDDTSSEVKRKKHKDEDWQMSGSGSPSQSGSDSESEE
ERDKSSCDETESDYEPKNKVKSRKPQNRTKTKNGKKILGQKKRQIDSSEEDYDEDYDNDK
RSSRRQATVNVSYKEDEEMKTDSDDLLEVCGEDVPQPEEEEFETIERFMDCRIGRKGATG
ATTTIYAVEADGDPNAGFEKNKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKL
DNYKKKDQETKRWLKNASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDY
YCKWQGLPYSECSWEDGALISKKFQARIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQ
PSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQL
YGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLKFNIL
LTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNS
LKELWSLLHFIMPEKFSSWEDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAK
VEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPD
NNEFYNKQEALQHLIRSSGKLILLDKLLIRLKERGNRVLIFSQMVRMLDILAEYLKYRQF
PFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQ
NDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLH
TGSAPSSSTPFNKEELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETHENEPGPL
TVGDELLSQFKVANFSNMDEDDIELEPERNSKNWEEIIPEDQRRRLEEEERQKELEEIYM
LPRMRNCAKQVSFNGSEGRRSRSRRYSGSDSDSVSERKRPKKRGRPRTIPRENIKGFSDA
EIRRFIKSYKKFGGPLERLDAIARDAELVDKSETDLRRLGELVHNGCIKALKDNSSGTER
TGGRLGKVKGPTFRISGVQVNAKLVISHEEELIPLHKSIPSDPEERKQYTIPCHTKAAHF
DIDWGKEDDSNLLIGIYEYGYGSWEMIKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYL
IKLLSKDLARKEAQRLSGAGGSKRRKTRAKKNKAMKSIKVKEEIKSDSSPLPSEKSDEDD
KDEITSVKHPNKKIKTERDSEEKPEPDVCIKKEPEEKREAKEKENKRELKREIKEKEDKK
DIKEKDFKEKRENKVKEAIEAMQKEKDIKEEKLSESKSDSKEKSKKSSVSDALVHITTSG
EPVPISEESEELDQKTFSICKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDH
ITECLKEYTNPEQIKQWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQESQQNNDQNSNL
NAPVIRNPDVDRLKENTNHDDSSRDSYSSDRHLSQYHDHHKDRHQGDSYKKSDSRKRPYS
SFSNGKDHRDWDHYKQDSRYYSDREKHRKLDDHRSRDHRSNLEGNLKDRSHSDHRSHSDH
RLHSDHRSSSEYAHHKSSRDYRYHSDWQMDHRASSSGPRSPLDQRSPYGSRSPFEHSIEH
KSTPEHTWSNRKT
NT seq
5442 nt
NT seq
+upstream
nt +downstream
nt
atgaatggacatagtgatgaagaaagtgttagaaacagtagtggagaatcaagccagtcg
gatgatgattctgggtcagcttcaggctctggatctggttccagttctggaagcagtagt
gatggaagcagtagccagtcaggtagcagtgactctgactctggatctgaatcgggcagt
cagtcagagtctgagtcagacacatcccgagagaacaaagttcaagcaaaaacaccaaaa
gttgatggagctgagttctggaaatctagccctagtattctggctgttcagagatctgca
atgctcaagaagcagcagcagcagcaacagcagcagcaacagcagcagcagcagcagcag
cagcagcaacaacaacatcaagcttcatctaatagtggatcagaagaggattcttctagc
agtgaagattccgatgacacatcaagtgaggttaaaaggaaaaagcataaagatgaagat
tggcaaatgtctgggtcaggatctccatctcagagtggttcagattcagaatctgaggaa
gaaagagacaaaagcagttgtgatgaaacagaatctgattatgagccaaaaaacaaagtt
aaaagcagaaaacctcaaaatagaactaagacaaaaaatggaaagaagattcttggacaa
aaaaagagacagattgattcttctgaggaggattatgatgaagattatgataatgataaa
agaagttctcgtcgtcaagcaactgtcaatgtgagctataaggaagatgaagaaatgaaa
acagattctgatgacctacttgaagtctgtggagaggatgttccacaacctgaggaagag
gaatttgaaacaatagaacggtttatggattgtcggattgggagaaaaggagctaccggt
gctactacaaccatctatgcagttgaagcagatggtgacccaaatgcaggatttgaaaaa
aacaaagaaccaggagaaattcagtatttaattaaatggaaaggatggtcccatattcac
aatacctgggagacagaagaaacccttaagcagcagaatgttagaggaatgaaaaaattg
gataattataagaaaaaagatcaggaaacaaaaagatggttgaaaaatgcttctccagaa
gatgtggaatattataattgccagcaagaacttacagatgatctacataaacagtatcaa
atagtggagcgaataattgctcattccaatcagaagtcagcagctggttatcctgattat
tattgtaaatggcagggccttccatactcagagtgcagctgggaagatggcgctctcatt
tccaaaaagtttcaagcacgtatagatgagtattttagcaggaatcagtcaaaaaccact
ccttttaaagattgcaaagtattaaaacaaaggccaagatttgtagccctaaaaaagcag
ccatcctatattggaggacatgaaggtttagaattaagagattatcaactgaatggttta
aattggcttgctcactcttggtgcaaaggaaatagttgcatacttgctgatgaaatgggc
cttggaaaaacaatacagacaatctcatttctgaactatttgtttcatgaacatcaatta
tatggaccttttctgttagtagtaccactctccactcttacttcctggcaaagggaaatt
cagacatgggcttctcagatgaatgctgtggtttatttaggtgacattaacagcagaaac
atgataagaactcatgaatggatgcatccccagaccaaaaggttaaaatttaatatactg
ttaacaacttatgaaattttattgaaggataaggcattccttggaggtctaaattgggct
tttataggtgtagatgaagcacatcgattaaagaatgatgactctcttctgtataaaact
ttaatagactttaagtccaatcaccgtctccttatcactggaactcctctacaaaactcc
ctcaaagagctctggtctttgcttcatttcattatgccagaaaagttttcttcctgggaa
gattttgaagaagaacatggcaaaggtagagaatatggttatgcaagcctccacaaggaa
cttgagccgtttctgttacgcagagttaaaaaagacgtggaaaaatcacttcctgctaag
gttgagcagattttaagaatggaaatgagtgctttacagaaacagtattacaagtggata
ttaactaggaattataaagccctcagcaaaggttccaagggcagtacctcaggctttttg
aacattatgatggagctaaagaaatgttgtaatcactgctacctcattaaaccaccagac
aataatgaattctataataaacaggaggccttacaacacttaatccgtagtagcggaaaa
ttgattcttcttgacaagctgttaattcgcctaaaagaaaggggcaatagagttcttatt
ttttctcaaatggtgcggatgttagatatacttgcagaatatttgaaatatcgtcaattc
ccctttcagagattagatggatcaataaaaggggaattgaggaaacaagctctagatcat
ttcaatgctgaaggatcagaggatttctgctttttgctttccacgagagctggaggtcta
ggaattaatttagcttctgccgacactgttgttatatttgactctgattggaatccacaa
aatgatcttcaggcacaggctagagctcatcgaatcgggcaaaagaaacaggtgaatatt
tatcgtctagttacaaagggatcagtggaagaggatattcttgaaagggccaaaaagaaa
atggttttagatcatcttgtgattcaaagaatggacacaactgggaagacagtactacac
acagggtctgccccctcaagttctactcctttcaataaagaagagttatctgccatttta
aaatttggtgctgaggaactttttaaggaaccagaaggagaagaacaagagccccaggaa
atggatatagatgaaatcttgaagagggctgaaactcatgaaaatgaaccaggcccttta
actgtaggagatgaattactttcccagttcaaggttgccaacttttcaaacatggatgag
gatgacattgagttggaacctgaaagaaattcaaaaaattgggaagaaatcattccagaa
gatcaaagacgacgattagaagaggaagaaagacaaaaagaacttgaagaaatttatatg
cttccaagaatgagaaactgtgctaaacaggttagtttcaatggaagtgaagggaggcgc
agtagaagtagaagatactctggatctgatagtgattcagtctcagaaaggaaaaggcca
aagaaacgtggaagaccacggactatccctcgagagaatattaaaggatttagtgatgca
gaaattcggcggtttatcaagagttacaagaaatttggtggccctctggaaagattagat
gcaattgctcgagatgctgaattagttgataagtcagagacagacctcaggcgactggga
gaattggtacataatggttgcattaaagctttaaaggataattcttcaggaacagaacga
acaggtggtagacttggaaaagtaaagggtccaacattccgaatatcaggagtacaggtg
aatgccaagctagtcatctctcatgaagaagaattaataccattgcacaaatccattcct
tcagatccagaagaaagaaagcagtacactatcccatgccatacaaaggcagctcatttt
gatatagactggggcaaagaagatgattccaatttgttaattggtatatacgaatatgga
tatgggagctgggaaatgattaaaatggatcctgacctcagtctgacacacaagattctt
cctgatgaccctgataaaaaaccacaagcaaagcagttgcagactcgtgcagactacctc
atcaaattacttagtaaagatcttgcaagaaaagaagctcagagactttctggtgcaggc
ggttcaaagaggagaaaaactagagccaagaagaataaagcaatgaaatctataaaagtg
aaagaggaaataaagagtgattcatctcccctgccctctgaaaagtctgatgaagatgat
aaggatgagatcacttctgtgaaacatccaaataaaaaaattaaaacagaaagagacagt
gaagaaaaacctgagccagatgtttgtataaagaaggaaccagaagaaaaaagggaagca
aaagaaaaggaaaataaaagagaacttaaaagggagataaaagaaaaagaggataagaaa
gatataaaagaaaaagattttaaagaaaaaagagaaaacaaagtaaaagaagctatagaa
gctatgcagaaagaaaaagacataaaggaagaaaagttgagcgaatccaagtctgatagc
aaggaaaaatccaagaaatcttcagtatcagatgctctagttcatatcactacaagtggt
gaaccagttcccatatctgaagaatctgaagaactggatcagaagacattcagcatttgc
aaagaaagaatgaggcctgtcaaagcagctttgaaacaacttgataggcctgagaaaggc
ctttcagaaagagaacaactagagcatactagacaatgtttaataaaaattggagaccat
atcacagaatgtctgaaggagtatacaaatcctgaacaaatcaaacagtggagaaaaaac
ctgtggatttttgtatctaagtttactgagtttgatgcaagaaagttgcataagttatat
aagcatgctattaaaaaacggcaggaatctcagcaaaataatgaccagaacagcaacttg
aatgctccagtgattagaaatccagatgtggacagattgaaagagaatacaaatcatgat
gatagcagcagggacagttattcttctgatagacacttatctcagtatcatgatcatcat
aaagaccgacatcagggagattcttacaaaaagagtgactccaggaaaagaccctattct
tctttcagtaatggcaaagatcatcgtgactgggatcactacaagcaagacagcagatat
tacagtgatagagagaaacatagaaaactggatgatcacaggagtagagatcacagatca
aatttggaaggaaatttaaaagatagatctcattcagatcatcgctctcattcagatcat
cggttacattcagatcatcggtcaagttctgaatatgcacatcataaatcttccagggat
tataggtatcactcagattggcaaatggaccacagagcttccagtagtgggcctaggtca
ccactagatcagaggtctccttatggctccagatctccatttgaacactcaattgaacac
aaaagtacacctgagcatacctggagtaatcggaaaacataa
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integrated database retrieval system
