Pteronotus mesoamericanus (Parnell's mustached bat): 129084245
Help
Entry
129084245 CDS
T09558
Symbol
PABPC1
Name
(RefSeq) polyadenylate-binding protein 1
KO
K13126
polyadenylate-binding protein
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Pathway
ppam03015
mRNA surveillance pathway
ppam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129084245 (PABPC1)
09123 Folding, sorting and degradation
03018 RNA degradation
129084245 (PABPC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppam03019
]
129084245 (PABPC1)
03041 Spliceosome [BR:
ppam03041
]
129084245 (PABPC1)
Messenger RNA biogenesis [BR:
ppam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
129084245 (PABPC1)
mRNA cycle factors
Stress granule specific factors
129084245 (PABPC1)
Spliceosome [BR:
ppam03041
]
Complex C
Other components
Complex C specific factors
129084245 (PABPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RBD_DEAH11
RRM_7
RRM_5
RRM_10
RBD_RDR6
RRM_occluded
RRM_3
YflT
Motif
Other DBs
NCBI-GeneID:
129084245
NCBI-ProteinID:
XP_054446296
LinkDB
All DBs
Position
Unknown
AA seq
636 aa
AA seq
DB search
MNPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFS
AFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKERE
AELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDENGKSKGFGFVSFER
HEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKN
LDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT
KPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGYFMAAIPQTQNRA
AYYPPSQIAQLRPSPRWTAQGARPHPFQNMPGAIRPAAPRPPFSTMRPTSSQVPRVMSTQ
RVANTSTQTMGPRPAAAAAAATPAVRTVPQYKYAAGVRNPQQHLNAQPQVTMQQPAVHVQ
GQEPLTASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESP
ESLRSKVDEAVAVLQAHQAKEAAQKAVNSATGVPTV
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccagcgcccccagctaccctatggcctcgctttacgtgggggacctacacccc
gacgtgaccgaggcaatgctctacgagaagttcagcccggccgggcccatcctctccatc
cgggtctgcagggacatgatcacccgccgctccttgggctacgcgtatgtgaacttccag
cagccggcggacgcggagcgtgctttggacaccatgaattttgatgttataaagggcaag
ccagttcgcatcatgtggtctcagcgtgatccatcacttcgcaaaagtggagtgggcaac
atattcattaaaaatttggacaaatccattgataataaagcactgtatgatacattttct
gcttttggaaacatcctctcatgtaaggtggtttgtgatgaaaatggttccaagggttat
ggatttgtacattttgagacacaggaagcagctgaaagagctattgaaaaaatgaatggg
atgcttctaaatgatcgcaaagtatttgttggacgatttaagtctcgtaaagaacgagaa
gcagaacttggagctagggcaaaagagttcaccaatgtttacatcaagaattttggagaa
gacatggatgatgagcgccttaaggatctctttggcaagtttggacctgccttgagtgtg
aaagtaatgaccgatgaaaatggaaaatccaaaggttttggatttgtaagcttcgaaagg
cacgaagatgcacagaaagctgtggatgagatgaatggaaaggagcttaatggaaaacaa
atatacgttggccgagctcagaaaaaagtggaacggcagacggaacttaaacgcaaattt
gaacagatgaagcaagataggatcaccagataccagggtgttaacctatatgtgaaaaat
ctcgatgatggcattgatgatgaacgtctccggaaagagttttccccgtttggtacaatc
actagtgcaaaggttatgatggagggtggtcgcagcaaagggtttggttttgtatgtttc
tcctccccagaagaagccactaaagcagttacagaaatgaatggtagaattgtggctacc
aagccattgtatgtagctttagctcagcgcaaagaagaacgccaggctcacctcactaac
cagtatatgcagagaatggcaagtgtgagagctgtgcccaaccccgtaatcaacccctac
cagccagcacctccttcaggttacttcatggcagctatcccacagactcaaaaccgtgct
gcatactatcctcctagccaaattgctcaactaagaccaagtcctcgctggactgctcag
ggtgccagacctcatccattccaaaatatgcccggtgctatccgcccagccgctcctaga
ccaccgtttagtactatgagaccaacttcttcacaggttccacgagtcatgtccacacag
cgtgttgctaacacatcaacacagacgatgggtccacgccctgcagctgctgctgctgca
gctactcctgctgtccgcaccgttccacagtataaatacgctgcgggagttcgcaatcct
cagcagcatcttaatgcacagccgcaagttaccatgcagcagcctgctgttcatgtacaa
ggtcaggagcctttgactgcttccatgttggcatctgcccctcctcaagagcaaaagcaa
atgttgggtgaacggctgtttcctctcattcaagccatgcaccctactcttgctggtaaa
atcactggcatgttgttggagattgataattcagaactacttcatatgcttgagtctcca
gagtctcttcgttctaaagttgatgaagctgtagctgtactacaagcccaccaagctaaa
gaggctgcccagaaagcagttaacagtgccactggtgttccaactgtttaa
DBGET
integrated database retrieval system
