Pteronotus mesoamericanus (Parnell's mustached bat): 129084680
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Entry
129084680 CDS
T09558
Symbol
COL2A1
Name
(RefSeq) collagen alpha-1(II) chain
KO
K19719
collagen type II alpha
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Pathway
ppam04151
PI3K-Akt signaling pathway
ppam04510
Focal adhesion
ppam04512
ECM-receptor interaction
ppam04518
Integrin signaling
ppam04974
Protein digestion and absorption
ppam05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
129084680 (COL2A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129084680 (COL2A1)
04518 Integrin signaling
129084680 (COL2A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129084680 (COL2A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
129084680 (COL2A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
129084680 (COL2A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ppam00536
]
129084680 (COL2A1)
Glycosaminoglycan binding proteins [BR:
ppam00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
129084680 (COL2A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
VWC2L_2nd
Motif
Other DBs
NCBI-GeneID:
129084680
NCBI-ProteinID:
XP_054446850
LinkDB
All DBs
Position
Unknown
AA seq
1487 aa
AA seq
DB search
MIRLGAPQTLVLLTLLVAAVLRCDGQDVQKAGSCVQDGQRYNDKDVWKPEPCRICVCDTG
TVLCDDIICEDMKDCLSPETPFGECCPICSTDLATASGQPGPKGQKGEPGDIKDIVGPKG
PPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFA
AQMAGGFDEKAGGAQMGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMG
PRGPPGPPGKPGDDGEAGKPGKPGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKG
EAGAPGVKGESGAPGENGSPGPMGPRGLPGERGRTGPAGAVGARGNDGQPGPAGPPGPVG
PAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKG
SAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQG
APGPAGEEGKRGARGEPGGAGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAG
PKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPG
VMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPG
PSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRG
LPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGISGPKGDRGDVGEKGPEGAPG
KDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGTAGARGAPGERGETGPPGPAGFAGPPG
ADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPG
AAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGDPGLQGPAGPPGEKGEPG
DDGPSGPDGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPG
PVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGPVGAPGAPGPPGSPGPAG
PTGKQGDRGEAGAQGPMGPAGPAGARGIPGPQGPRGDKGETGEAGERGLKGHRGFTGLQG
LPGPPGPAGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAG
PPGNPGPPGPPGPPGPGIDMSAFAGLGGREKGPDPLQYMRADQAAGNLRQHDAEVDATLK
SLNNQIESIRSPEGSRKNPARTCRDLKLCHPEWKSGDYWIDPNQGCTLDAMKVFCNMETG
ETCVYPNPANVPKKNWWSSKSKEKKHIWFGETINGGFHFSYGDDNLAPNTASVQMTFLRL
LSTEGSQNITYHCKNSIAYLDEAAGNLKKALLIQGSNDVEIRAEGNSRFTYTVLKDGCTK
HTGKWGKTMIEYRSQKTSRLPIIDIAPMDIGGPEQEFGVDIGPVCFL
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcctcggggctcctcagacgctggtgctgctgacgctgctcgtcgccgctgtc
cttcggtgtgacgggcaggatgtccagaaggctggcagctgtgtgcaggacgggcagagg
tataatgataaggatgtgtggaagcccgagccctgccggatctgtgtctgtgacactggg
actgtcctctgcgacgacataatctgtgaagacatgaaagactgcctcagccccgagacc
cccttcggagagtgctgccccatctgctcaactgacctcgccactgccagtgggcaacca
ggaccaaagggacagaaaggagaacctggagacatcaaggatattgtaggacccaaagga
ccccctgggcctcagggacctgcaggtgaacaaggacccagaggtgatcgtggcgacaaa
ggtgaaaaaggtgcccctggacctcgtggcagagatggagagcctgggacccccggaaat
cctggtcctcccggcccgcctggcccccctggtccccctggccttggtggaaactttgct
gcccagatggctggaggattcgacgagaaggctggtggcgcccagatgggagtaatgcaa
ggaccaatgggccccatgggaccacgaggacctccaggccctgctggtgctcctggacct
caaggatttcaaggcaaccctggcgaacctggggagcccggcgtgtctggccccatgggt
ccccgtggtcctccaggcccccctggaaaacctggtgacgatggtgaagctggaaagcct
ggaaaacctggtgaaagaggccctcctggccctcagggtgctcgcggcttcccaggaacc
ccaggccttcctggtgtcaaaggtcacagaggttacccagggctggacggtgctaagggt
gaagccggtgctccgggtgtgaaaggggagagcggtgcccctggtgagaacggttctccg
ggcccaatgggtccccgtggcctgccgggtgagagaggacggactggccctgcaggcgcc
gtgggtgcccggggcaacgatggtcaacccggccccgcagggcctccgggtcccgtgggt
cctgctggcggtcctggcttccctggggctcccggtgccaagggtgaagctggtcccact
ggtgctcgtggtcctgaaggcgctcaaggtcctcgcggtgaacctggcactcctgggtcc
cccgggccggctggtgcctctggtaaccccggaacagatggaattcctggagccaaagga
tctgctggtgctcctggcattgctggtgctcctggcttccctgggccacgtggtcctcct
ggccctcaaggggcaactggtcctttgggcccaaaaggtcagacgggtgagcctggtatt
gctggcttcaaaggcgaacaaggccccaagggagaacctggccctgcaggcccccaagga
gcccctgggcctgctggtgaagaaggcaaaagaggtgcccgtggagagcctggtggcgct
gggcccatcggtccccctggagaaagaggtgctcctggcaaccgtggtttccctggtcaa
gatggtctggcaggtcccaagggagcccctggagagcgagggcccagtggccttgctggc
cccaagggagccaatggcgaccctggccgacctggagagcctggccttcctggagcccgg
ggtctcactggccgccccggtgatgctggtccgcaaggcaaagtcggtccttctggagcc
cctggtgaagacggtcgccctggacctccaggtcctcagggggctcgtgggcagcctggt
gtcatggggttccctggccccaaaggtgccaatggcgagcctgggaaagctggtgagaaa
ggactaccgggcgctcctggtctgagaggtcttcctggcaaagatggtgagacgggtgct
gcaggcccccctggacctgctggaccggccggtgaacgaggcgagcagggtgctcctggg
ccatctgggttccagggacttcccggccctcccggtcccccaggtgaaggtggaaaacca
ggtgaccagggcgttccgggtgaagctggagcccccggcctcgtgggccccagaggggaa
cgaggtttcccaggtgaacggggctcccctggagcccagggcctccaggggccccgtggc
ctccccggcacccccggcactgatggtcccaaaggtgcatctggccccgcgggcccccct
ggggctcagggccctccaggtctgcaggggatgcccggcgagaggggagcagctggtatt
tctgggcccaagggagacaggggcgatgttggtgagaaaggccctgagggagcccccggg
aaggacggtggacgaggtctgacgggtcccatcggcccccccgggcctgctggtgccaat
ggtgagaagggagaagtcggtcctcctggtcctgcaggaacagctggtgctcgaggcgcc
cctggcgaacgtggagagactggacctcccgggcccgctggattcgcaggtcctcctggc
gctgatggccagccaggtgccaagggtgagcaaggagaagctggccagaaaggcgacgct
ggtgccccaggtcctcagggtccctctggagctcctgggcctcagggtcctactggtgtg
actggtcctaaaggagcccgaggtgctcaaggccccccgggagccaccggattccccgga
gctgctggccgtgttggacccccaggctccaatggtaaccctggaccccctgggccccct
ggtccttctggaaaagatggtcccaaaggtgctcgaggagacagcggcccccctggccga
gctggtgaccctggcctccaaggtcctgctggaccccctggcgagaagggagagcctgga
gatgatggtccctctggtcccgacggtcctccaggtccccagggtctggctggtcagagg
ggcatcgttggtctccctgggcagcgtggtgaaagaggattccccggcttgcccggccca
tcgggtgagcctggcaagcagggagctcctggtgcatctggagacagaggccccccgggc
cccgtgggtcctcctggcctgactggtcctgctggtgaacctggacgagagggaagccct
ggtgctgacggcccccctggcagagatggtgcagctggagtcaagggtgatcgtggtgag
actggacctgtgggtgctcctggagcccctgggccccctggctctcctggccccgccggc
ccaactggcaagcagggagaccgaggagaagcgggtgcacaaggccccatgggacctgca
ggaccagccggagcccgcggaatcccaggccctcaaggcccccgaggtgacaaaggagaa
actggagaagctggcgagagggggctgaagggacaccgtggcttcactggtctgcagggt
cttcctggcccacctggtcctgctggagaccaaggtgcttcgggtcctgccggtccttct
ggccctcgaggtcctcctggccccgttggtccctctggcaaagatggcgcgaatggcatc
cctggccccattggacctcctggtccccgtggacgttcaggcgaaacaggccctgcgggc
cctcctggaaatcccggaccccctggccctccaggtccccctggccctggcattgacatg
tcagcctttgctggcttaggcgggcgagagaagggccccgaccccctgcagtacatgcgg
gccgaccaggcagccggcaacctgaggcagcacgacgctgaggtggatgccacactcaag
tccctcaacaaccagattgagagcatccgcagccccgagggctcccgcaagaaccccgct
cgcacctgccgggacctgaaactctgccaccccgaatggaagagcggagactactggatc
gaccccaaccagggctgcaccttggacgccatgaaggttttctgcaacatggagactggc
gagacctgcgtctaccccaacccagcgaatgttcccaagaagaactggtggagcagcaag
agcaaagagaagaaacatatctggtttggagaaaccatcaacggtggcttccacttcagc
tatggagatgacaacctggctcccaacactgccagcgtccagatgaccttcttgcgcctg
ctgtccaccgagggctcccagaacatcacttaccactgcaagaacagcatcgcctacctg
gatgaagcagctggcaacctcaagaaggccctgctcattcagggttccaacgacgtggag
atccgggctgagggcaacagcaggttcacgtatacagtcctgaaggatggctgcacgaaa
cacaccggtaagtggggcaagactatgatcgagtaccggtcacagaagacctcgcgcctc
cccatcattgatattgcacccatggacataggagggcccgagcaggaatttggtgtggac
atagggcccgtctgcttcttgtaa
DBGET
integrated database retrieval system
