Pteronotus mesoamericanus (Parnell's mustached bat): 129084863
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Entry
129084863 CDS
T09558
Symbol
PRPF40B
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B
KO
K12821
pre-mRNA-processing factor 40
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Pathway
ppam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129084863 (PRPF40B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppam03041
]
129084863 (PRPF40B)
Spliceosome [BR:
ppam03041
]
Complex A
U1 snRNP components
U1 related factors
129084863 (PRPF40B)
Complex B
129084863 (PRPF40B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
DUF4936
RhoGAP-FF1
WW_2
Motif
Other DBs
NCBI-GeneID:
129084863
NCBI-ProteinID:
XP_054447114
LinkDB
All DBs
Position
Unknown
AA seq
898 aa
AA seq
DB search
MSVPDSGPRPPAAPAPFPPGPPMMPPPFMPPPGIPPPFPPMGLPPMSQRPPAIPPMPPGI
MPPMLPPMGSPPPLTQIPGMVPPMMPGMLMPAVPVTAATAPGVDTASSAVAGTGPPRALW
SEHVAPDGRIYYYNADDKQSVWEKPSVLKSKAELLLSQCPWKEYKSDTGKPYYYNNQSKE
SRWTRPKDLDDLEALVKQEAIGKQQQQQPQTQQTLQPQPPQPQPDPPPMPPGPTPVPVGL
LEPEPGGSEDCDVSDAAQTSEPGFLQQPEDGPSSSAGQHQPPQQEEEESKPEPERSGLSW
SNREKAKQAFKELLRDKAVPSNASWEQAMKMVVTDPRYSALPKLSEKKQAFNAYKAQREK
EEKEEARLRAKEAKQTLQHFLEQHEHMTSTTRYRRAEQTFGELEVWAVVPERDRKEVYDD
VLFFLAKKEKEQAKQLRRRNIQALKSILDGMSSVNFQTTWSQAQQYLMDNPSFAQDHQLQ
NMDKEDALICFEEHIRALEREEEEERERARLRERRQQRKNREAFQTFLDELHETGQLHSM
STWMELYPAVSTDVRFANMLGQPGSTPLDLFKFYVEELKARFHDEKKIIKDILKDRGFCV
EVNTAFEDFAHVISFDKRAAALDAGNIKLTFNSLLEKAEAREREREKEAARRLRRREAAF
RSMLRQAVPALELGTAWEEVRERFVCDSAFEQITLESERIRLFREFLQVLETECQHLHTK
GRKHGRKGKKHHRKRSHSPSGSESEEEELPPPSLRPPKRRRQNPSESGSEPSSSLDSVES
GGAALGGRGSPSSRLLLGSDHGLRKTKKPKKKTKKRRHKSNSPESVTDPEEKAGKESDEK
EPEQDKDRELRLAELPNRSPGFGIKKEKTGWDTSESELSEGELERRRRTLLQQLDDHQ
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgtcggttcccgattctggtccccggcccccagcagcgcctgcccccttcccaccgggg
ccccccatgatgccaccacccttcatgccccctccaggaatccccccgccttttcctccg
atggggctaccccccatgagccagagaccacccgccatcccccccatgccgcccggcatc
atgccccccatgctcccaccaatggggtcgccgccgccactcacgcagataccaggaatg
gtacctcccatgatgccaggaatgctgatgccagcggtgcctgtcaccgcagcgacggct
ccaggtgtggacaccgccagctctgctgtggctgggacaggccctccgagggccctatgg
agtgagcatgtggcccctgatgggcgcatctactactacaatgctgacgacaagcagtcc
gtgtgggagaagcccagcgtgctcaagtccaaggcagagcttttgctgtcccagtgcccc
tggaaagagtataagtcggacacaggcaaaccttactactataacaaccagagtaaggag
tcccgctggacccggccgaaggacttggatgacctggaggctctagtcaaacaagaggcc
atagggaagcagcagcagcagcagccacagacacagcagactctacagccgcagcctcct
cagccacagcctgaccccccgcctatgcctcctggccccaccccagtgcctgtgggcctc
ctcgaaccggagcccggcgggagtgaagattgcgacgtgtcagatgccgcccagacctcg
gagccggggttcttgcagcagccagaggacggccccagcagttctgctggacagcatcag
ccaccacaacaggaggaagaggaatcaaagccagaaccagagaggtctggcctcagttgg
agcaaccgggagaaggcaaaacaggcctttaaggagctgctgagggacaaggctgtcccc
tccaatgcctcatgggaacaagccatgaagatggtggtcaccgacccccgttacagtgcc
ttgcccaaactgagtgagaaaaagcaggcattcaatgcgtacaaggcgcagcgggagaag
gaggagaaagaagaggcccggctaagggccaaggaggctaagcagaccttgcagcacttc
ttggagcagcacgagcacatgacctccaccacccgctaccggcgggcagagcagaccttt
ggggagctggaggtctgggctgtggtccctgagagggatcgaaaagaggtttatgatgac
gtcctcttcttcctggccaagaaggagaaggaacaggccaagcagctccggcgccgcaat
atccaggctctgaagagcatcctggatgggatgagcagcgtcaacttccaaaccacatgg
tcccaggcccagcagtacctcatggataaccccagctttgctcaggaccatcagcttcag
aacatggacaaggaagatgcactgatctgctttgaggagcacatccgagctttggagagg
gaggaggaggaggagcgggagcgggcccggcttcgggagcggcgccagcaacgcaagaac
cgggaggccttccagaccttcctggacgagctgcacgagacagggcagctgcactccatg
tccacctggatggaactgtacccagcggtcagcactgatgtccgctttgccaacatgctg
ggccagccgggctccacccctctggacctgttcaagttctatgtggaggagttgaaggcc
cgatttcacgatgagaagaagatcattaaggacatccttaaggaccggggcttctgtgtg
gaagtgaacacagcctttgaggacttcgcccacgtcataagctttgacaagagggctgct
gcgctggacgcaggcaacatcaagctgaccttcaatagtctgctggagaaagcagaggca
cgggagagagagcgcgagaaggaggcggcacgaaggctgcggcgcagggaagctgccttc
cgaagcatgctgaggcaggccgtgcctgctctggagctgggcactgcctgggaagaggtc
cgtgagcgctttgtgtgcgactcagcctttgagcagatcaccctggagtcggagcggatc
cggctcttccgggagttcctgcaggtactggagactgaatgccagcacctccacaccaaa
ggccgaaagcacggcagaaagggcaagaagcaccatcgcaagcgttcccactcgccctca
ggctctgagtcggaagaagaggagctgcccccaccgtctctccggcccccgaagcggagg
cggcagaacccctccgaatctggctctgagccctcttcctcacttgattcagttgaaagt
gggggagctgcccttggaggacggggctccccatcctcccgccttctcctcggatcagat
catggccttcggaaaaccaagaaaccaaaaaagaaaactaaaaagagaagacacaagtcg
aacagtcctgagagtgtgacagaccctgaggagaaagctggcaaggagagtgatgagaaa
gaaccagaacaggacaaggacagggagctccggctggcagagctccctaatcgctcccca
ggttttggaatcaagaaggagaagacgggctgggacacgtcagaaagtgagctgagtgag
ggtgagctggaaaggcggcggcggacactcctgcagcagctggatgaccaccagtga
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