Pteronotus mesoamericanus (Parnell's mustached bat): 129084918
Help
Entry
129084918 CDS
T09558
Symbol
PDZRN4
Name
(RefSeq) PDZ domain-containing RING finger protein 4 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppam04121
]
129084918 (PDZRN4)
Enzymes [BR:
ppam01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129084918 (PDZRN4)
Ubiquitin system [BR:
ppam04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
129084918 (PDZRN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
Sina_ZnF
zf-rbx1
PDZ_Tricorn
zf-RING_6
IBR_1
Motif
Other DBs
NCBI-GeneID:
129084918
NCBI-ProteinID:
XP_054447204
LinkDB
All DBs
Position
Unknown
AA seq
1028 aa
AA seq
DB search
MGFALERFAEAVDPDFECKLCGQVLEEPLCTPCGHVFCAGCLLPWAARRRRCPLQCQPLA
PGELYRVLPLRSLIHKLRIRCDYRTGGCGRSIPLHELAAHLERCDFGPSRRRRWGCVLGP
GGRGGKDVPARGGCGTAPRAARGGSARGGLPGGRCGSGRGPGPRVLAWRRREKALQGEVQ
LTARRYQEKFTQYMAHVRNFARDLSGGHGPDGEYKPFTIVLERENDTLGFNIIGGRPNQN
NQEEISTEGIYVSKILENGPADRADGLEIHDKIIEVNGKDLSKATHEEAVEAFRNAKEPI
VVQVLRRTPLSKPIYGTAPEVQLMNASTQTDITFEHIMALAKLRPPTPPVPDICPFLLSD
SCHSLHPMEHEFYEDNEYLSSLPADADRTEDFEYEEVELCRVSSQEKLGLTVCYRTDDEE
DTGIYVSEVDPNSIAAKDGRIREGDRILQINGEDVQNREEAVALLSSDECKRIVLLVARP
EMQLDEGWLEDERNEFLEELNLEMLEEQHNEAMQHTANEVEQPKKQEEEEGTTDTATSSS
NNHEKDSGVGRTDESLRNDESSEQENTAEDPNRPSLKNKRELGQSQDTLGSVELQCNESF
VSGEYIDSDCPGNQDEECERFRQLLELKCKIQNHGECDLYYSSSTIECNQGEQGVEHELQ
LLNEELRNIELECQNIMQAHRLHKVTEQYGDIWALHDGGFRNYNTSIDTQRGKLDDIIEH
PERSDKDSSSAYNTAESCRSTPLTVDRSPDSSLPRMINLTNKKNLRSTIATNQSSSGQSS
KESTSTKAKSTEQGCGIEGKEISESNKLSDQEKTGSEHIPYLSPYHSSSYRYANIPAHAR
HYQSYMQLIQQKSAVEYAQSQLSLVSMCKESQKCSEPKMEWKVKIRSDGTRYITKRPVRD
RILKERALKIKEERSGMTTDDDTMSEMKMGRYWSKEERKQHLVRAKEQRRRREFMMRSRL
ECLKESPQSGSEGKKEINIIELSHKKMMKKRNKKILDNWMTIQELMTHGAKSPDGTRVHN
AFLSVTTV
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgggctttgccctggagcgcttcgccgaagccgtggacccggatttcgagtgcaaactg
tgcggccaggtgctggaggaacccctgtgcacgccttgcgggcacgtcttctgcgctggc
tgcctgctgccctgggcagcgcggcggcgccggtgcccgctgcagtgccagcccttggct
cccggcgagctgtaccgggtgctgcctctgcgcagcctcatccacaagctgcgcatccgg
tgtgactaccgcaccggcggctgcggccgctctatcccgctgcacgagctggcggcgcac
ctcgagcgctgcgactttggcccttcccgccgccgccgctggggctgcgtcttggggccg
ggcggccgcggaggcaaggacgtgcccgcgcgggggggctgcggcactgcgcccagggcc
gcccggggcgggagcgcgcgcggggggctgccgggcggccgctgcgggagcgggcggggg
cccgggcctcgagtgctcgcctggaggcggcgcgagaaggcgctgcagggcgaggtgcag
ctcacggcccgcaggtaccaggagaagttcacccagtacatggctcacgtccgcaacttc
gccagggacctgagcggcggccacggcccggatggagaatataagccattcaccattgtt
ttagaaagagaaaatgacactttgggatttaatattataggaggtcgaccaaatcagaat
aatcaggaagaaatatcaacagaagggatttatgtctcaaaaattttggaaaatggacct
gctgacagagcagatggcctggaaattcatgacaaaatcattgaggtcaacgggaaggat
ctctcaaaggccacccatgaagaggcagtggaagcttttcgaaacgccaaggagcccatt
gtggttcaggtgctgaggcgcacacctctaagtaaaccaatctatggaacggcccctgaa
gtgcagctcatgaacgccagcacccagacagacattacctttgaacacatcatggccctg
gccaaacttcgaccacctacccctcccgtgccagacatctgtccatttctgctctcagac
agctgccattctcttcatccgatggagcatgaattttatgaggacaatgagtatctttcc
agcttgcctgctgatgcagacagaacagaggactttgaatatgaggaggtcgagttgtgt
cgtgttagcagtcaagagaagctgggtctgacagtctgttaccgaacggatgatgaagaa
gacaccggcatttatgtcagcgaggtagatccgaacagcattgctgccaaagatggccga
attcgagaaggggatcgtatattgcaaataaatggggaggatgtccagaatcgagaagaa
gcagtggcgttgctctccagcgatgagtgcaagagaatcgtgctgcttgttgccaggcca
gagatgcagctggatgaaggctggctggaagatgaaaggaatgaattcttagaggagtta
aacttggagatgttggaagaacaacataatgaagcaatgcagcacactgccaatgaggtg
gagcagccaaaaaaacaagaagaagaagaaggcacaacagacacagccacatcctcatct
aacaaccacgagaaggacagtggagtggggcgcacagatgaaagcctgcggaatgatgag
agctcagagcaagagaacacagctgaggatcccaacagaccatccttgaagaataagaga
gagctggggcagagccaagacactctgggcagcgttgagcttcagtgcaatgagagcttt
gtgtcaggtgaatacattgactcagactgccccggcaaccaagatgaggagtgtgaacga
ttccggcagctcttggagctcaaatgcaagattcaaaaccatggagagtgtgacctgtat
tactcgagtagcacaatagaatgcaaccaaggggaacaaggagtggagcatgagctacag
ttgctaaatgaagagctaagaaacattgaacttgagtgtcagaatatcatgcaggctcac
aggctccataaggtaacagagcagtatggagacatctgggcattgcatgacggaggattc
cgaaattataacaccagcattgatacgcaaagaggaaaattagatgacatcatcgaacat
ccagaaaggtcagacaaggacagttctagtgcttacaacacagctgaaagctgcagaagc
actccactcactgtggaccgctcccccgacagctcccttccaaggatgatcaacctcacc
aataagaaaaacctgagaagcacaattgcaaccaatcagtcctcttctggacagagcagt
aaagagtcgacctccaccaaagccaaaagcactgaacaaggttgtggcatcgaaggcaag
gagatttcagaaagcaacaagctttctgatcaagagaagacgggcagtgaacatatccct
tacctctctccttaccatagctcctcgtataggtatgcaaacatcccagcacacgcccgg
cattatcaaagctacatgcagttaattcaacagaaatctgctgtcgaatatgctcagagt
cagctgagtttggtaagcatgtgcaaggagtcccagaagtgttcagaacccaagatggag
tggaaggtgaaaattaggagcgatgggacccggtacatcacaaaaagaccagtgcgagac
cggattctgaaggaacgtgccttaaagatcaaggaggagcggagtggcatgacgacagac
gatgacaccatgagcgagatgaaaatggggcgctactggagcaaagaggagagaaagcaa
cacctggttcgggccaaagagcagcgccggcgccgagagttcatgatgcggagccggtta
gagtgtctcaaggagagtcctcagagcggcagcgagggcaagaaggagatcaatatcata
gaactgagtcacaaaaagatgatgaagaaaagaaacaagaaaattttggacaactggatg
acaatccaagaactgatgacccatggggccaagtcgcctgatggcacacgagttcataat
gcctttttgtcagtcaccactgtatga
DBGET
integrated database retrieval system
