Pteronotus mesoamericanus (Parnell's mustached bat): 129085938
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Entry
129085938 CDS
T09558
Symbol
DDX6
Name
(RefSeq) probable ATP-dependent RNA helicase DDX6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Pathway
ppam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129085938 (DDX6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppam03019
]
129085938 (DDX6)
03036 Chromosome and associated proteins [BR:
ppam03036
]
129085938 (DDX6)
Enzymes [BR:
ppam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129085938 (DDX6)
Messenger RNA biogenesis [BR:
ppam03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
129085938 (DDX6)
mRNA degradation factors
5'-3' decay
Decapping complex
129085938 (DDX6)
Chromosome and associated proteins [BR:
ppam03036
]
Eukaryotic type
Gene silencing
piRNA pathway
129085938 (DDX6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CMS1
NA-iREase2
Motif
Other DBs
NCBI-GeneID:
129085938
NCBI-ProteinID:
XP_054448334
LinkDB
All DBs
Position
Unknown
AA seq
483 aa
AA seq
DB search
MSTARTENPVIMGLSSQNGQLRGPVKPSGGPGGGGTQTQQQINQLKNTNTINNGTQQQAQ
SMTTTIKPGDDWKKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPS
PIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQV
SQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHV
QMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINL
MEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYS
CFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLH
RIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNIDKSLYVAEYHSEPVED
DKP
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgagcacggccagaacagaaaaccctgttataatgggtctgtccagtcaaaatggtcag
ctgaggggccctgtgaagcccagtggtggccctggaggagggggcacacagacacagcaa
caaataaaccagctgaaaaacaccaacacaatcaataatggcactcagcagcaagcacag
agtatgaccaccactattaaacctggcgatgactggaaaaagactttaaaactccctcca
aaggatctaagaatcaaaacttctgatgtaacctccacaaaaggaaatgagtttgaagat
tactgtttgaaacgggagttactgatgggaatttttgaaatgggctgggaaaagccatct
cctattcaggaggagagcattcccattgctttatctggtagggatattttagctagagca
aaaaatggaacaggcaagagtggtgcctacctcattcccttacttgaaaggctagacctg
aagaaggacaatatacaagcaatggtgattgttcctacaagagaacttgctctacaggtc
agtcaaatttgcatccaggtcagcaaacacatgggaggagccaaagtgatggcaaccaca
ggaggaaccaatttacgggatgacataatgaggcttgatgatacagtgcacgtggtaata
gctacccctgggagaatcttggatcttatcaagaaaggagtagcaaaggttgatcatgtc
cagatgatagtattggatgaggcagataagttgctgtcacaggattttgtgcagataatg
gaggatattattctcactctacctaaaaacagacagattttattatattctgctactttc
cctcttagtgtacagaagttcatgaattcccatttgcagaaaccctatgagattaacctg
atggaggaactaactttgaagggagtaacccagtactacgcatatgtaactgagcgccaa
aaagtacactgcctcaacacacttttctccaggcttcagataaaccagtcgatcattttc
tgtaactcctctcagcgagttgaattgctagccaagaagatttctcaactgggttattct
tgcttctatatccatgctaaaatgaggcaggaacatcgaaatcgtgtctttcatgatttc
cgaaatggcttatgccgcaatcttgtttgcactgatttgtttacccgaggtattgatata
caagctgtgaatgtggtaataaactttgacttcccaaagctggcagagacctatctccat
cgtattggaagatcaggtcgctttggtcatcttggcttagccatcaacttgatcacatat
gatgatcgcttcaacctgaaaagtattgaggagcagctgggaacagaaattaaacctatt
ccaagcaacattgacaagagcctatatgtggcagaataccacagtgagcctgtagaagat
gataaaccataa
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integrated database retrieval system
