Pteronotus mesoamericanus (Parnell's mustached bat): 129086218
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Entry
129086218 CDS
T09558
Symbol
TOP3B
Name
(RefSeq) DNA topoisomerase 3-beta-1 isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Pathway
ppam03440
Homologous recombination
ppam03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
129086218 (TOP3B)
03460 Fanconi anemia pathway
129086218 (TOP3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppam03032
]
129086218 (TOP3B)
03400 DNA repair and recombination proteins [BR:
ppam03400
]
129086218 (TOP3B)
Enzymes [BR:
ppam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
129086218 (TOP3B)
DNA replication proteins [BR:
ppam03032
]
Eukaryotic type
DNA Topoisomerases
129086218 (TOP3B)
DNA repair and recombination proteins [BR:
ppam03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
129086218 (TOP3B)
FA (Fanconi anemia) pathway
129086218 (TOP3B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Motif
Other DBs
NCBI-GeneID:
129086218
NCBI-ProteinID:
XP_054448661
LinkDB
All DBs
Position
Unknown
AA seq
874 aa
AA seq
DB search
MVIPVLHIISFFFQSATLARWSRLGSGQQAFMKHLGNMSSHKGLNGTCSVHEYTGTFAGQ
PVRFKMTSVCGHVMTLDFLGKYNKWDKVDPAELFSQAPTEKKEANPKLNMVKFLQVEGKG
CDYIVLWLDCDKEGENICFEVLDAVLPVMNPAHGGEKTVFRARFSSITDTDICSAMARLG
EPDHNEALSVDARQELDLRIGCAFTRFQTKYFQGKYGDLDSSLISFGPCQTPTLGFCVER
HDKIQSFKPETYWVLQAKVNADKDRSLLLDWDRVRVFDREIAQMFLNMTKLEKEAQVEAT
SRKEKAKQRPLALNTVEMLRVASSSLGMGPQHAMQTAERLYTQGYISYPRTETTHYPENF
DLKGPLRQQANHPYWADTVKRLLAEGINRPRKGHDAGDHPPITPMRSATEAELGSEAWRL
YEYITRHFIATVSYDCKYLQNTISFRIGPEHFTCTVKTVISPGFTEIMPWQSVPLEESLP
PCQRGDTFPVAEVKLLEKQTSPPDYLTEAELITLMEKHGIGTDASIPVHINNICQRNYVI
VESGRRLKPTNLGIVLVHGYYKIDAELVLPTIRSAVEKQLNLIAQGKADYRQVLGHTLDV
FKRKFHYFVDSIAGMDELMEVSFSPLAATGKPLSRCGKCHRFMKYIQAKPSRLHCSHCDD
TYTLPQNGTIKLYKELRCPLDDFELVLWSSGSRGKSYPLCPYCYNHPPFRDMKKGMGCNE
CTHPTCQHSLSMLGIGQCVECENGVLVLDPTSGPKWKVACNKCNVVAHCFENAHRVRVSS
ETCSSCEAALLDVDFNKAKSPLLGDETQHTGCVFCDPVFQELVELRHAASCHPMHRGGPG
RRQGRGRGRGRRPAGKPSARRPKDKMSALAAYFV
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atggtcattcctgttttacacattatttctttctttttccaaagtgcgactctggcccgc
tggagtagactcggttcaggacagcaggcattcatgaagcaccttgggaacatgtcctca
cacaaaggactgaatggaacgtgttcagtgcatgagtacacagggaccttcgctggccag
ccagtccgcttcaagatgacgtctgtctgtggtcatgtgatgaccctggatttcctggga
aagtacaacaaatgggacaaagtggatcccgcggagctgttcagtcaagcccccacagag
aagaaggaagctaaccccaagctgaacatggtgaagttcctgcaggtggagggcaaaggc
tgcgactacatcgtgctatggctggactgtgacaaggaaggggagaacatctgctttgag
gtcctggatgccgtgctgcctgtcatgaatccggcccatggcggtgagaagacagtgttc
cgggccaggttcagctccatcacggacacggacatctgcagtgccatggcccgcctgggc
gagcccgaccacaacgaggcactctccgtggatgcccggcaggagctggacctgcgcatt
ggctgtgccttcaccaggtttcagaccaagtatttccaggggaaatatggcgatttagac
agctctctcatctcctttgggccatgtcaaacccctaccctgggattctgcgtggagaga
catgacaaaatccagtccttcaaaccggagacctactgggtgctgcaggccaaggttaat
gctgataaagacagatctctccttttagactgggaccgagtgcgagtgtttgatcgagag
atcgcgcagatgtttttaaacatgaccaagctggagaaggaagcccaggtcgaagccaca
agcaggaaagaaaaagccaagcagaggcccctggccctgaacactgtggagatgctccgt
gtggccagctcttccctgggcatggggccccagcacgccatgcagaccgctgagcgcctc
tacacccaaggctacatcagctacccacgaactgagaccacccactaccccgagaacttt
gacttgaagggccctctacggcaacaggccaaccacccctactgggccgacacggtgaag
agattgttagcagaaggtatcaaccgcccacggaaaggtcacgatgctggcgaccatccc
cccatcacccccatgaggtctgccacggaggctgaattagggagcgaggcatggcggctc
tatgagtacatcactaggcacttcatcgccacggtcagctatgactgcaagtacctccag
aacaccatttccttcaggatcgggcctgagcacttcacctgcaccgtgaagaccgtcatc
tcaccaggctttacagagatcatgccctggcagagcgtgcccctggaggagagcctgccc
ccctgccagcggggcgacaccttccctgtggccgaggtgaagttgctggagaagcagacg
agcccacccgactacctgacggaggccgagctcatcaccctcatggagaagcacggcatc
gggacagatgccagcatccctgtgcacatcaacaacatctgccagcgcaactatgtgatc
gtggagagtggacgtcggctcaagcccactaacctcggcattgtgctggtgcacggctac
tacaagattgatgcggagctggtgctccctaccatccgaagcgctgtggagaaacagctg
aacctgattgcccagggcaaggctgactaccgccaggtcctgggccataccctggacgtc
ttcaagaggaagttccactacttcgttgactccatcgcaggcatggacgagttgatggag
gtgtccttttcacctctggcagccacaggcaagccgctctcccgctgtggaaagtgccac
cggttcatgaagtacatccaggccaagccaagtcgcctgcattgctcccactgtgacgac
acctacaccctcccccagaatggcaccatcaagctctacaaggagctccggtgcccgctg
gatgacttcgagctggttctgtggtcatcgggctctcggggcaagagctacccactgtgc
ccctattgctacaaccacccgcccttccgggacatgaagaaaggcatgggctgcaatgag
tgcacgcaccccacctgccagcactcgctgagcatgctgggcatcggccagtgcgtagag
tgcgagaacggtgtgctggtgctggaccccacctcaggccctaagtggaaggtggcctgc
aacaagtgcaacgtggtggcgcactgctttgagaatgcccaccgcgtgcgggtgtcctcc
gagacctgcagctcctgtgaggctgccctgctcgacgtggacttcaacaaggccaagtcc
ccactcctgggcgatgagacgcagcatacgggctgtgtcttctgcgaccccgtcttccag
gagctggtggagctgaggcacgcggcctcctgccaccccatgcaccgaggtgggccggga
aggaggcagggccgagggcggggccggggccggcggcctgctgggaagcccagtgccagg
cgaccaaaggacaagatgtcagccctggctgcctacttcgtatga
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