Pteronotus mesoamericanus (Parnell's mustached bat): 129086592
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Entry
129086592 CDS
T09558
Symbol
LIG3
Name
(RefSeq) DNA ligase 3 isoform X1
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Pathway
ppam03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
129086592 (LIG3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppam03400
]
129086592 (LIG3)
Enzymes [BR:
ppam01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
129086592 (LIG3)
DNA repair and recombination proteins [BR:
ppam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
129086592 (LIG3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
129086592
NCBI-ProteinID:
XP_054449177
LinkDB
All DBs
Position
Unknown
AA seq
1000 aa
AA seq
DB search
MTLALKTLLPPALRALSRKEPSLFREHLWPDTKPFSHWSEADRLHGRGLLQKRKPILSFQ
KGPLRPRATSLVPLPGSHAGLCGEPCEMAEQRFCVDYAKRGTAGCKKCKEKIVKGVCRIG
KVVPNPFSEAGGDMKEWYHIKCMFEKLERARATTKKIEDLTELEGWEELEDNEKEQISQH
IADLSSKAPSTPKKKAVVQAKLTATGQVTSPGKGASAAPRTNARKFSGFSAAKPNNSAEA
CPSPAPKRSLSSSKCDPKHKDCLLREFRKLCAMVAENPSYNTKTQIIQDFLRKGSAGDGF
HGDVYLTVKLLLPGVIKSVYNLNDKQIVKLFSRIFNCNPDDMARDLEQGDVSETIRVFFE
QSKSFPPAAKSLLTLQEVDAFLVRLSALSKEDEQQQALQGIAARCTANDLKCIIRLIKHD
LKMNSGAKHVLDALDPNAYEAFKASRNLQDVVERVLRNEQEVEKEPGRRRTLSVEATLMT
PVQPMLAEACKSIEYAMKKCPNGMFSEIKYDGERVQVHKSGDHFSYFSRSLKPVLPHKVA
HFKDYIPQAFPGGHSMILDSEVLLIDNQTGKPLPFGTLGVHKKAAFQDANVCLFVFDCIY
FNDVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKRVTKASDLADMINRVIREGLEGLVL
KDVKGTYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFLMGCYDPS
SQKWCTVTKCSGGHDDATLARLQKELDMVKISKDPSKIPSWLKINKIYYPDFIVPDPKKA
AVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLSKERADFT
VVAGEEGSSPTGGSSGENGGSSGPAASHGARTSPQQPPTSARKAGGKLSHPGSSGGHQLT
AKPSPVRVGEKRKASDEAPCQAKVLLDIFTGVRLYLPPSTPDFSRLRRYFVAFDGDLVQE
FDMASATHVLGSRDKNPEAQQVSPEWIWACIRKRRLVAPC
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgactttggctttgaagaccctcctcccaccagccctccgtgcactcagccgaaaagaa
ccgagcctgttccgagaacacctctggccagacacgaagccgttcagccactggtcagaa
gcagatcggcttcacgggcgcggcctcctccagaaaagaaagcccattctgtcattccaa
aaaggccctctgagaccacgtgccaccagccttgtccccttgccagggtcgcatgcggga
ctctgcggtgagccctgcgagatggccgagcaacggttctgtgtggactacgcaaagcga
ggcacagctggctgcaaaaaatgcaaggaaaagattgtgaagggcgtgtgccggatcggc
aaggtggtgcccaaccccttctcagaggctgggggtgacatgaaagagtggtaccacata
aagtgcatgtttgagaaactggagcgggcccgggccaccacgaaaaaaattgaggacctc
acggagctggaaggctgggaagagctggaagataatgagaaggagcagataagccagcac
attgcagatctgtcttctaaggcaccgagcacaccgaagaagaaagccgtggtgcaggcc
aagctgaccgccaccggccaggtgacgtccccagggaagggtgcttcagccgccccccgc
accaatgcccggaaattttctggcttttcagcagccaaacccaacaactccgcggaagcc
tgccccagccctgcacctaagagaagcctctcctcaagcaaatgtgaccccaagcacaag
gactgcctgctccgtgagtttcggaagctgtgcgccatggtggctgaaaatccgagctac
aacaccaagacccagatcatccaggacttcctccggaaaggctcggcaggagatggtttc
cacggtgacgtgtacctaacggtgaagctgctgctgccaggggtcattaagagcgtttac
aacttgaatgataagcagattgtgaagcttttcagccgcatttttaactgcaacccggat
gatatggcacgagacctagagcagggcgacgtgtcagagacgatcagggtcttctttgag
cagagcaagtctttccccccggccgccaagagcctcctcacgctccaggaggtggacgcc
ttcctcgtgcggctctctgcgctcagcaaggaggatgagcagcagcaggccctgcagggc
atcgccgccaggtgtacagccaacgacctgaagtgtatcatcaggttgatcaaacatgat
ctgaagatgaactcaggtgcaaaacacgtgctagacgccctcgaccccaatgcctacgaa
gccttcaaagcctcacgcaacctgcaggacgtggtggagcgcgtcctccgcaatgagcag
gaggtggagaaggagccaggccggaggcggacactcagtgttgaggccacgctcatgacc
ccggtgcagcccatgctggccgaggcctgcaagtccatcgagtacgcgatgaagaagtgt
cccaacggcatgttctctgaaatcaagtatgacggggagcgggtccaggtgcacaagagc
ggggaccacttcagctacttcagccgcagcctcaagcctgtcctgcctcacaaggtggcc
cactttaaggactacatccctcaggctttccctgggggccacagcatgatcctggactcg
gaggtgctcctgatcgacaaccagacaggcaaaccgctgcccttcgggactctgggcgtg
cacaagaaagctgccttccaggatgctaatgtctgtctgtttgtgtttgattgtatctac
ttcaatgatgtcagcttgatggacaggcctctgtgcgagcggcggaagtttcttcatgat
aacatggtggaaattcccaaccggatcatgttctcagagatgaagcgagtgacaaaagct
tcagacttggccgacatgataaaccgggtgatccgagaggggctggaagggctggtgctg
aaggatgtgaagggtacctatgagcctgggaagcggcactggctgaaagtgaagaaagac
tatttgaacgagggggccatggccgacacagctgacctggtggtccttggggccttctac
gggcaagggagcaaaggtggcatgatgtccatcttcctcatgggctgctacgacccgagc
agccagaagtggtgcacggtcaccaagtgttcgggaggccacgacgacgcgacgctggcc
cgcctgcagaaggagctggacatggtgaagatcagcaaggatcccagcaagatacccagc
tggctgaaaatcaacaagatctactatcccgacttcatcgtcccagacccaaagaaagcc
gccgtgtgggagatcacaggggccgagttctccaaatccgaggctcacacggccgatggc
atctccatccggttccctcgctgcacccgaatccgggacgataaggactggaagtctgcc
accaacctcccccaactcaaggagctataccagctgtccaaggagagggcagacttcacg
gtggtagctggcgaagagggcagctcccctacagggggcagcagcggagagaacgggggc
agctcagggcctgcagcgtctcacggggccagaacctctccccagcagccccccaccagt
gccaggaaggcaggagggaagctgagtcaccccggcagctcaggtggccaccagctgact
gcaaagccgtcccctgtgagagtgggagagaagcggaaggcttcagatgaggccccgtgc
caagcaaaggtgctgctggacatcttcacgggggtgcggctctacctgccgccctccacc
ccagacttcagccgtctcagacgctactttgtggcattcgatggggacctggtacaggaa
tttgacatggcctcagccacacatgtgctgggtagcagggacaagaaccctgaggcccag
caggtctcccccgagtggatctgggcatgcatccggaaacggagactggtagctccctgc
tag
DBGET
integrated database retrieval system
