Pteronotus mesoamericanus (Parnell's mustached bat): 129086778
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Entry
129086778 CDS
T09558
Symbol
UPF2
Name
(RefSeq) regulator of nonsense transcripts 2 isoform X1
KO
K14327
regulator of nonsense transcripts 2
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Pathway
ppam03013
Nucleocytoplasmic transport
ppam03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129086778 (UPF2)
03015 mRNA surveillance pathway
129086778 (UPF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppam03019
]
129086778 (UPF2)
Messenger RNA biogenesis [BR:
ppam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
129086778 (UPF2)
mRNA cycle factors
P-body specific factors
129086778 (UPF2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
129086778
NCBI-ProteinID:
XP_054449462
LinkDB
All DBs
Position
Unknown
AA seq
1272 aa
AA seq
DB search
MPAERKKPASMEEKESLLNNKEKDCGERRPVSNREKPKEEIKLPAKKEVIKVPEDKKKKL
EEDKRKKEDKERKKKEEEKVKAEEELKKKEEEEKKKHEEEERKKQEEQAKRQQEEEAAQL
KEREESLQLHQEAWERHQLRKELRSKNQNAPDNRPEENFFSRLDSSLKKNTAFVKKLKTI
TEQQRDSLSHDFNGLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYVDFAPSLL
QVWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRES
HTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKFNLTFPPSEIISPEKQQPFQNLLKEYFT
SLTKHLKRDHRELQNTERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLLD
ENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPAI
LFKDNEKSCQNKECNKDDSKAEAKEPKDNKEVSNPDDLELELENLEINDDTLELEGTDEA
EDLTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKAN
RKKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINI
ETKNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPES
HLRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLY
KDLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQED
VGIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFG
VNPDGSPSSLDPPEHLFRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLE
VWTKDHPFPIDIDYMISDTLELLRPKIKLCNSLEESIRQVHDLEREFLIKLGLVNDKDSK
DSIAEGENLEEDEEEEEGGAETEEQSGNESEVNEPEEEEGSDNDEDEGEEEEEENTDYLT
DSNKENETDEENTEVMIKGGGLKHVPCVEDEDFIQALDKMMLENLQQRSGESVKVHQLDV
AIPLHLKSQLRKGPPLGGGEGEAESTDTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWN
QQQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPN
ADLIFKTGGRRR
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgagcgtaaaaagccagcaagtatggaagaaaaagaatctttgctaaacaac
aaggaaaaagactgtggtgaaaggaggccagtgagcaacagggagaaaccaaaagaggag
atcaagctccctgccaagaaggaagttattaaggtccctgaagataaaaagaagaaactg
gaagaagataagaggaaaaaagaagacaaggaacgcaagaaaaaagaagaagaaaaggtg
aaggcagaagaggaattaaagaaaaaagaggaagaagaaaagaagaaacatgaagaggaa
gagagaaagaagcaagaagaacaggcaaaacgacaacaagaggaagaagctgcccagttg
aaagaaagagaagagtctcttcagcttcatcaggaagcttgggaacgacatcagttaagg
aaagaacttcgcagcaaaaaccaaaatgctccagacaaccgaccagaggaaaatttcttt
agtcgactagactcaagtttgaagaaaaataccgcttttgtcaagaaactaaaaactatt
acggaacaacagagagactccttgtcccatgattttaatggcctaaatttaagcaaatac
attgcagaagctgtagcttctattgtggaagcaaagctaaaaatatctgacgtgaattgt
gctgtgcacttatgttctctgtttcaccagcgctatgtcgactttgccccgtcacttctg
caggtttggaaaaaacattttgaagcaaggaaagaagagaaaacacctaacattaccaaa
ttaagaactgatttgcgtttcattgcagaattgacaatagttgggattttcactgacaag
gaaggtctttctttaatctatgaacagctaaaaaatattattaatgctgatcgggagtca
catactcatgtttctgtggtgattagtttttgtcgacattgtggagatgatattgctgga
cttgtaccaaggaaagtaaagagtgcagcagagaagtttaatttgacttttcctcctagt
gagataattagtccagagaaacagcaacctttccagaatcttttaaaagaatactttaca
tctttgaccaaacacctgaaaagggaccacagggagctacagaatactgagagacaaaac
aggcgtattctacattctaaaggggagctaagtgaagatagacataaacagtatgaggaa
tttgctatgtcttaccagaagctgctggcaaattctcaatccttagcagaccttttggat
gaaaatatgccagatcttcctcaggacaaaccaacaccagaagagcatgggcctggaatt
gatatatttacacctggtaaacctggagaatatgacttggaaggtggtatatgggaagat
gaagatgctcggaatttttatgagaaccttattgatttgaaagcgtttgttccagccatc
ttgtttaaagataatgaaaaaagttgtcagaataaagaatgcaacaaagatgattctaaa
gcagaggcaaaggaacctaaggataataaggaggtatcaaatcctgatgatttggaactt
gaattggagaacctggaaattaatgatgacaccttggagttagagggtacagatgaagct
gaagatcttacaaagaaacttcttgatgagcaagaacaagaggatgaagaagccagcact
ggatctcatctcaagctcatagtagatgctttcctccagcaactgcccaactgtgtcaat
cgagatctgatagacaaggcagcaatggatttttgcatgaacatgaacacaaaagcaaat
aggaagaagttggtacgggcactttttatagttcccagacaaaggttggatttgctacca
ttttatgcaagattggttgctacattgcatccctgcatgtctgatgtagcagaggatctt
tgttccatgctgaggggggatttcagatttcatgtacgaaaaaaagaccagatcaacatt
gaaacaaagaacaaaactgttcgttttattggagaactaactaaatttaagatgttcaca
aaaaatgatacactacattgtttaaagatgcttctatcagacttctcccatcaccatatt
gaaatggcatgtaccttactggaaacatgtggaaggtttcttttcagatctccagaatct
cacttgaggaccagtgtacttttggaacaaatgatgagaaagaaacaagcaatgcatctt
gatgcaagatatgtcacaatggtagagaatgcgtattactactgcaacccacctccagct
gagaaaacagtgaaaaagaaacgtcctcctctccaggagtatgtccggaagcttttatac
aaggatctctccaaggttaccactgagaaggttttgagacagatgcgaaagttgccctgg
caggaccaagaagtgaaagactatgttatttgttgtatgataaacatctggaatgtgaaa
tataatagtattcattgtgtggctaacctcttagcaggactagtgctctaccaagaggat
gttggaatccatgttgtggacggagttttagaagatattcgattaggaatggaggttaac
caacctaaatttaatcagagacgtatcagcagcgccaagttcttaggggaactttataat
taccgaatggtagaatcagctgttatttttagaactctttattcttttacatcatttggt
gttaaccctgatggctctccaagttcactggaccctcccgagcaccttttcagaattaga
ttagtgtgcactattttggatacctgtggccagtactttgacagaggttccagtaaacga
aaacttgattgcttccttgtatattttcagcgttatgtttggtggaagaaaagtttggag
gtttggacaaaagaccatccatttcctattgacatagattacatgatcagtgatacgcta
gaactgctaagaccaaagatcaaactctgtaattctctggaagaatccatcaggcaggta
cacgacttggaacgagaattcttaataaaactaggcctagtaaatgacaaagattcaaaa
gattctatagcagaaggagaaaatcttgaagaagatgaagaagaagaggaaggaggagct
gaaacagaagaacaatctggaaatgaaagtgaagtaaatgaaccagaggaagaggagggt
tctgataatgatgaggatgaaggagaggaagaagaggaagaaaacacagattaccttaca
gattcaaataaggagaatgaaactgatgaagaaaatactgaggtaatgatcaaaggaggt
ggacttaaacatgtaccttgtgtagaagatgaggacttcattcaagctctggataaaatg
atgttagaaaatcttcagcaacgaagtggcgaatctgttaaggtgcaccaacttgatgtt
gctattcccttgcatctcaaaagccagctgaggaaagggcccccacttggtggtggggaa
ggagaggcagaatccacagacactatgccatttgtcatgttaacaagaaaaggcaataaa
cagcagtttaagatccttaatgtacccatgtcttcccaacttgctgcaaatcattggaac
cagcaacaggcagagcaagaagaaaggatgagaatgaaaaagctcacactagatatcaat
gaacgacaagaacaagaagattatcaagaaatgctgcagtctcttgcccagcgcccagct
ccagcaaacaccaatcgggagcggcggcctcgttaccaacatccaaagggagcgcctaat
gcagatctaatctttaagactggtgggaggagacgttga
DBGET
integrated database retrieval system
