Pteronotus mesoamericanus (Parnell's mustached bat): 129087038
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Entry
129087038 CDS
T09558
Symbol
CASC3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Pathway
ppam03013
Nucleocytoplasmic transport
ppam03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129087038 (CASC3)
03015 mRNA surveillance pathway
129087038 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppam03019
]
129087038 (CASC3)
Messenger RNA biogenesis [BR:
ppam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
129087038 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
129087038
NCBI-ProteinID:
XP_054449799
LinkDB
All DBs
Position
Unknown
AA seq
699 aa
AA seq
DB search
MADRRRQRASQDTEDEESGASGSDSGGSLARGGGGCSSSAGGSGSGSLPSQRGGRAGALH
LRRVESGGARSAEESECESEDGIEGDAVLSDYESAEDSEGEQGEYSEEENSKVELKSEAN
DAANSSTKEEKGEEKPDSKGTVTGERQSGDGQESTEPVENKVPKHLDDDEDRKNPAYIPR
KGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALYGYDI
RSAHNPDDIKPRRIRKPRFGSPPQRDPNWTGERSNKSYRHQGPGGTLPPRTFINRKAAGT
GRMSAPRNYSRSGGFKEGRAGFRPVEAGGQHGGRSGETVKHESSYRSRRLEPTPVRDPSP
EADAQVLGSPEKEEAVSEVPAPAPDTAPPPPDRPIEKKSYSRARRTRIKAGDAVKVAEEV
PPPPEGLTPAPQVPETTPPPPAKTGNWEAPVDSTTGGLEQDVAQLNITEQNWNPGQPSFL
QPRELRGMHNHIHMGAGPPPQFNRMEEMGVQGGRAKRYSSQRQRPVPEPPAPPMHISIME
GHYYDPLQFQGPIYTHGDSPAPLPPQGMIVQPEMHLPHPGLHPHQTPAPLPNPGLYPPPV
SMSPGQPPPQQLLAPTYFSAPGVMNFGNPSYPYAPGALPPPPPPHLYPSTQAPSQVYGGV
TYYNPAQQQVQPKPSPPRRTPQPVTIKPPPPEVVSRGSS
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaggcggcggcagcgcgcttcgcaggacacagaggacgaagagtctggtgct
tccggctcagacagcggcggttcactagctcggggcggggggggctgcagcagtagtgct
ggaggcagcggcagcggctctctgccttcccagcgcggaggccgagctggggcccttcat
ctgcggcgggtggagagcgggggtgccaggagcgctgaagagtcggagtgtgaaagtgaa
gatggcatcgagggcgatgctgttctctcggattatgaaagtgcagaagactcagaaggt
gaacaaggggagtacagtgaagaagaaaactccaaagtagagttgaaatcagaagccaat
gatgcggctaattcttcaacaaaagaagagaagggagaagaaaagcctgactccaaaggc
actgtgacgggagagaggcaaagtggggatggacaggagagcacagagcctgttgagaac
aaagtacccaaacatttggatgatgatgaagatcggaagaacccagcatacataccacgg
aaagggctcttctttgagcatgatcttcgagggcaaactcaggaggaggaagtcagaccc
aaggggcgtcagcgaaagctgtggaaagatgagggtcgctgggagcatgacaagttccga
gaagatgaacaggccccaaagtcccgacaggagctcattgctctttatggatatgacatc
cgttcagctcacaatcctgatgacatcaaaccccgaagaatccggaaacccaggtttggg
agtcctccacagagagatccaaactggactggtgagcggtcaaacaagtcttatcgccac
cagggtcctggaggtaccctaccaccaaggacatttatcaacaggaaagctgcaggtact
ggccgcatgtctgctcccaggaattattctcgatctgggggcttcaaggaaggtcgagct
ggatttaggcctgtggaggctggtgggcagcatggtggccggtctggtgagactgttaaa
catgagagtagttatcgatcacgacgcctggagccgactcctgtgcgggatccatctcca
gaagcagatgctcaagtgcttggcagtcctgagaaggaagaggcagtctcagaggtacca
gctcctgctcctgacactgcaccaccgccccctgacaggcctattgagaagaaatcctat
tcccgggcaagaagaaccagaatcaaagctggagatgccgtcaaggttgcagaggaagtg
ccccctccacccgaagggctgactccagcacctcaagtcccagaaactactcctcctcca
cctgctaagactgggaactgggaggctccagtggattctactacaggtggacttgagcaa
gatgtggcacaactaaacataacagaacagaattggaatccagggcaaccttcattcttg
caaccacgcgaacttcggggaatgcacaaccacatacacatgggagcaggacctccacct
cagtttaaccggatggaagaaatgggtgtccagggtgggcgagccaaacgctattcatct
cagcggcagagacctgtgccagagccccctgcccctcccatgcatatcagtatcatggag
ggacattactatgatccattgcagttccagggaccaatctatacccatggtgacagccct
gccccactgcctcctcagggcatgattgtgcagccagaaatgcacctcccccacccaggt
ttacatccccaccagacaccagcacctctgcccaatccgggcctctatcccccaccagtt
tccatgtctccaggacagccaccacctcagcagttgctcgctcctacttacttctccgct
ccaggtgtaatgaactttggtaatcccagttacccttatgctccgggggcactgcctccc
ccaccacctcctcatctgtatcccagtacacaggccccatcacaggtatacggaggagtg
acttactacaaccccgcccagcagcaggtgcagccaaagccctcaccaccccggaggact
ccgcagccagtcaccatcaagcccccaccacctgaggttgtaagcaggggttccagttaa
DBGET
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