Pteronotus mesoamericanus (Parnell's mustached bat): 129087143
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Entry
129087143 CDS
T09558
Symbol
DDX54
Name
(RefSeq) ATP-dependent RNA helicase DDX54 isoform X1
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppam03009
]
129087143 (DDX54)
Enzymes [BR:
ppam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129087143 (DDX54)
Ribosome biogenesis [BR:
ppam03009
]
Eukaryotic type
Pre-60S particles
Helicases
129087143 (DDX54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
Acetone_carb_G
Motif
Other DBs
NCBI-GeneID:
129087143
NCBI-ProteinID:
XP_054449930
LinkDB
All DBs
Position
Unknown
AA seq
878 aa
AA seq
DB search
MAVREHQVARPRSRPAMAQRRKKKGLRRRRGAASQALSSDSEDGEFEIQAEDDTRAQKLG
PGRPLPTFPTSECTSDVEPDTREMVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPT
PIQRKTIPVILDGRDVVAMARTGSGKTACFLIPMFERLKTRSAQTGARALILSPTRELAL
QTMKFTKELGKFTGLKTALILGGDKMEDQFSALHENPDIIIATPGRLMHVAVEMNLKLQS
VEYVVFDEADRLFEMGFAEQLQEIIGRLPGGQQTVLFSATLPKMLVEFARAGLTEPVLIR
LDVDAKLNEQLKTSFFLVREDTKAAVLLYLLRTVVRPQDQTVVFVATKHHAEYLSELLTA
QRMSCAHIYSALDQTARKINLAKFAHGKCSTLIVTDLAARGLDIPLLDNVINYSFPAKGK
LFLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGRALSLACPQEEPSGAGGVDGVL
GRVPQSVVDDEDCSVRSTLEASLELRGLGRVADNAQQQYVRSRPAPSPESIKRAKELDLT
GLGLHPLFSSRFEEKELQRLRLVDSIQKYRSRATIFEINASSRDFSSQVMRAKRQKDSKA
IASFQQGRQRRQEGLPGPAPSCSVPKEEQPEEEEAAAAAGESVEDVFTEVVGRKRPRPGP
DCGAKRRREEGRQRDQDFYVPYRPKDFDSERGLSVGGDGGTFEQQVAGAVLDLMGDEAQN
LTRGQQQLKWDRKKKRFVGQTGQEKKKIKTESGHYISSSYKQDLYKKWKQKQKIDDRDSE
EEGASDRRGPERRGWKRGRGQGASQPRTPGTPTGHVRSELKTKQQILKQRRKAQKMRFLQ
RGGLKQLSARNRRHAQELQRGAFGRGARSKKGKMRKRM
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggctgtccgagagcaccaggtggccagaccgcggtcgcgacctgccatggcccagcgg
aggaaaaagaagggacttcggaggcgccggggcgcggcctcccaggccctcagcagtgac
tcggaggacggcgagtttgagatccaggcggaagatgacacccgggctcagaagctggga
cctggccgacccctgcccaccttccccacctcggagtgcacctcggacgtggagccggac
acgcgggagatggtgcgggcccagaacaagaagaagaagaagtcaggaggcttccagtcc
atgggcctgagctacccggtgttcaaaggcatcatgaagaagggctataaggtgcccaca
cccatccagaggaagaccatcccggtgatcctggatggcagggacgtggtcgccatggcc
cggacgggcagcggcaagacagcctgcttccttatccccatgttcgagcggctcaagacc
cgcagcgctcagaccggggcccgagccctcatcctctcgcccacccgagagctggccctg
cagaccatgaagttcaccaaggagctgggcaagttcaccggcctcaagactgccctgatc
ctgggtggggataaaatggaggaccagttttcagccctgcacgaaaacccggacataatc
attgccacccctgggcgcctgatgcatgtggcggtggagatgaacctgaagctgcagagc
gtggagtacgtggtatttgacgaggccgacaggctctttgaaatggggtttgcggagcag
ctgcaggagatcatcggccgcctcccggggggccagcaaacggtcctgttctccgccacg
ctgccaaaaatgctggtggaatttgcccgggctggcctcacggagcccgtactcattcgg
ctggacgtggacgccaaactcaacgagcagctcaagacctctttcttcctggtgcgggag
gacaccaaggctgccgtgctcctctacctgctgcgcactgtggtgcggccccaggaccag
acggtggtgtttgtggccacaaagcaccacgcggagtacctcagtgagctgctgacggcc
cagcggatgagctgcgcccacatctacagcgctctggaccagacggcccgcaagatcaac
ctcgccaagttcgcccacggcaagtgctccacgctcatcgtgaccgacctggccgcccga
ggcctggacatcccgctgctggacaacgtcatcaactacagcttcccagccaagggaaag
ctcttcctgcaccgtgtgggtcgtgtggcccgggccggccgaagtggcacagcctactcc
ttggtggccccagatgaagtcccctacctgctggacctgcacctgttcctgggccgtgcc
ctctcccttgcctgcccccaggaggagccctcaggcgcgggcggcgtggatggcgtgctg
ggccgggtgccgcagagcgtggtggacgatgaggactgcagcgtgcggagcaccctggag
gcgtcgctggagctgcggggcctgggccgcgtggccgacaacgcccagcagcagtatgtg
cgctcacggccggcgccctcaccagagtccatcaagcgggccaaggagctggacctcacg
gggctgggcctgcaccccctcttcagctcgcgcttcgaggaaaaggagctgcagcggctg
aggctggtggacagcatccagaagtaccgctcgcgggcgactatctttgaaatcaacgcc
tcaagccgggacttcagcagccaggtgatgcgtgccaagcggcagaaggacagcaaggcc
atcgccagcttccagcaggggcggcagaggcggcaggagggcctgcctggcccagcccca
agctgctcagtgccgaaggaggagcagcctgaggaggaggaggcagcggcggccgcggga
gagagcgtggaggacgtcttcacggaggtcgtgggccggaaacggccgcggccaggacct
gactgtggagccaagaggcggagggaggagggccggcagcgcgaccaggacttctacgtc
ccctatcggcccaaggacttcgacagcgaacgcggcctgagtgtcggtggggacggcggc
acctttgagcagcaggtggctggcgcggtcctggacttgatgggggacgaggcccagaac
ctgaccaggggccagcagcagctcaagtgggaccggaagaagaagcggtttgtgggacag
acaggacaggagaagaagaagatcaagacagaaagtggccactacatcagcagctcctat
aagcaggacctctataagaagtggaagcagaaacagaaaatcgacgaccgcgactcggag
gaggaaggggcatcagaccggcgaggcccagagcgaagaggttggaagcggggccgaggc
caaggtgcctcccagccccgcaccccaggcacccccacaggccacgtgcgctcagagctc
aagaccaagcagcagatcctgaagcagaggcgcaaagcccagaagatgcgcttcctgcag
cgtgggggcctcaagcagctctccgcccgcaaccggcgccatgcccaggagctgcagcgg
ggcgcctttggccggggcgcccgctccaagaagggcaagatgaggaagaggatgtaa
DBGET
integrated database retrieval system
