KEGG T09558: 129087684

Pteronotus mesoamericanus (Parnell's mustached bat): 129087684

Entry

129087684         CDS       T09558

Symbol

SMARCC1

Name

(RefSeq) SWI/SNF complex subunit SMARCC1 isoform X1

K11649

SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C

Organism

ppam Pteronotus mesoamericanus (Parnell's mustached bat)

Pathway

ppam03082

ATP-dependent chromatin remodeling

ppam04714

Thermogenesis

ppam05225

Hepatocellular carcinoma

Brite

KEGG Orthology (KO) [BR:ppam00001]
09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    129087684 (SMARCC1)
09150 Organismal Systems
  09159 Environmental adaptation
   04714 Thermogenesis
    129087684 (SMARCC1)
09160 Human Diseases
  09162 Cancer: specific types
   05225 Hepatocellular carcinoma
    129087684 (SMARCC1)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ppam03021]
    129087684 (SMARCC1)
   03036 Chromosome and associated proteins [BR:ppam03036]
    129087684 (SMARCC1)
Transcription machinery [BR:ppam03021]
Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     129087684 (SMARCC1)
Chromosome and associated proteins [BR:ppam03036]
Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    129087684 (SMARCC1)
   PBAF complex
    129087684 (SMARCC1)
   GBAF(ncBAF) complex
    129087684 (SMARCC1)

SSDB

Motif

Pfam:

SWIRM-assoc_2 SWIRM-assoc_3 SWIRM-assoc_1 SWIRM Myb_DNA-binding Myb_DNA-bind_6 HEAT_GCN1 Chromo BRCT_2 DUF919 SpeFL

Other DBs

NCBI-GeneID:

129087684

NCBI-ProteinID:

XP_054450607

LinkDB

Position

Unknown

AA seq 1102 aa
MAAAAGGSGPGSAAGAAGAGGAAVAAGLAVYRRKDGGPAPKFWESPETVSQLDSVRVWLG
KHYKKYVHADAPTNKTLAALVVQLLQFQEEAFGKHVANPAFTKLPAKCFMDFKAGGTLCH
ILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQSNCLTRPNIYLMPDIDLKL
ANKLKDIIKRHQGTFTDEKSKASHHIYPYPASQEDEEWLRPVTRKDKQVLVHWGFYPDSY
DTWVHSNDVDAEIEDPPIPEKPWKVHAKWVLDTDVFNEWMNEEDYEVDENRKPVSFRQRV
STKNEEPVRSPERRDRKASANARKRKHSPSPPPPTPTESRKKSGKKGQASLYGKRRSQKE
EDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLDEQDEDAVTTGG
KEDEDPSKGDQSRPVDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNK
SKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVD
PESRPMAMGPPPTPHFNVLADTPSGLVPLHLRSPQVPAAQQMLNFPEKNKEKPIDLQNFG
LRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILH
FLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALE
EFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEPEKLEGAEEEK
METDTDGQQPEKAENKGENEPDEGDKAQDGDNEKTSEKEQDSEVSEDTKSEEKETEENKE
LTDTYKERESDIGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEERKIKSLVALLV
ETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYAELRARQQMEQ
QHGQNPPPGHQHSGGPGLAPLGAAGHPGMMPHQQPPPYPLMQHQMPPPHPPQPGQIPGPG
SMMPGQPMPGRMIPTVAANIHPPGSGPPPPGMPPMPGSISGPRVTLTAPNGMYPPPPQQP
PPPPADAVPPPPAPGPPASAAP

NT seq 3309 nt +upstreamnt +downstreamnt
atggccgcggcagcgggcggcagcgggccggggtcggcggcgggcgcggcgggtgcggga
ggcgcggcggtggccgcgggcctggccgtttatcggcggaaggacgggggcccggccccc
aagttttgggagagcccggagacggtatcccagctggattcggtgcgggtctggcttggc
aagcactacaagaagtacgttcatgcggacgcgcccaccaataaaacgctggctgcgctg
gtggtgcagcttctccagttccaggaagaagcctttgggaagcatgtcgccaacccagcc
ttcaccaagctccctgcaaaatgtttcatggatttcaaagctggaggcaccttgtgtcac
atcctcggggctgcttacaagtataaaaatgaacagggatggcggaggtttgatctacag
aatccatcccgaatggatcgtaatgttgagatgtttatgaatattgaaaaaacattggta
cagagcaattgtctgaccagacccaacatctacctcatgccagatattgatctgaagttg
gctaacaaattgaaagatatcatcaaacgacatcaggggacatttactgatgagaagtca
aaagcttcccaccacatttatccatatcctgcctcacaagaagatgaagaatggctgagg
cccgtgacgaggaaagacaagcaggtgctggtgcactggggcttttacccggacagctat
gatacgtgggtccatagtaatgatgttgatgcggaaattgaagatccaccaattccagaa
aagccatggaaggttcatgcaaaatgggttttggacactgatgttttcaatgaatggatg
aacgaggaggactatgaggtggatgagaacaggaagcccgtgagttttcgacagcgagtt
tcaacgaagaatgaagagccagtcagaagtccagagagaagagacagaaaagcatcagct
aatgctcgaaagaggaagcattctccatcccctccgcctcccacacccacggagtcacgg
aagaagagtgggaagaaagggcaagctagtctttatgggaagcgcagaagtcagaaagag
gaagatgagcaagaagatcttaccaaggatatggaagacccaacaccagtacccaacata
gaggaagtggtacttccaaaaaacgtaaatccaaagaaagatagtgaaaatacacctgtt
aaaggaggaactgtagccgatctagatgaacaggatgaagacgcagttacaacaggagga
aaggaggacgaagaccccagcaaaggcgatcagagccgacccgttgaccccggtgaagat
aatgtgacagagcagaccaaccatattattatccccagctatgcttcatggtttgattac
aactgtattcacgtgattgaacggcgtgctcttccagagtttttcaatgggaaaaacaaa
tccaagactccagagatatacttggcatatcgaaattttatgattgacacctatcgccta
aacccccaagagtatttgaccagcaccgcctgccgaaggaacttgactggggacgtgtgt
gctgtgatgagggttcatgcctttttagagcagtgggggcttgttaattaccaagttgat
ccagaaagccggcccatggcaatgggacctcctcctactcctcatttcaatgtattggct
gataccccctctgggctcgtgcctctgcatcttcgatcgcctcaggtccctgctgctcag
cagatgttaaattttcctgagaagaacaaggaaaaaccaattgatttgcagaactttggt
ctccgtactgacatttactccaagaaaaccttagcaaagagtaaaggtgccagcgccgga
agagagtggactgagcaggagaccctgctcctcctggaggccctggagatgtacaaggat
gattggaacaaagtctcagagcacgtcggaagtcgtactcaggacgagtgcatcctccac
ttcctgcggctccccattgaggacccgtacctggagaattcagatgcttcccttgggccc
ctggcctaccagcctgtcccctttagtcaatcaggaaacccagtcatgagcaccgtggcc
tttttggcatctgtggtggaccctcgtgtggcatctgctgcagcaaaggcagctttggag
gagttttcacgggtccgggaggaggtaccactggaattggtagaagctcatgtcaagaaa
gtacaagaagcagctcgggcctctgggaaggtggatcccacctacggcctggagagcagc
tgcatcgcaggcacagggcctgatgagccagaaaagcttgaaggagctgaagaggaaaaa
atggaaacggatactgatggtcagcagcctgaaaaggcagaaaacaaaggggaaaatgaa
cccgatgaaggtgataaagcacaggatggcgacaatgaaaaaactagcgagaaggaacag
gatagtgaagttagtgaggataccaaatcagaggaaaaggagactgaagagaacaaggaa
ctcactgatacttataaagagagagaaagtgatattgggaagaagaaagtagaacatgaa
atctctgaaggaaatgtagccacagccgcagcagctgctcttgcctcagctgcaaccaaa
gccaagcacctggctgctgtggaagagagaaagatcaagtctcttgtcgccctcctggtg
gagacacagatgaagaagctggagatcaaactgcggcatttcgaggagctggagacgatc
atggacagagagaaagaggctttagaacagcagaggcagcagttgcttactgaacgccag
aacttccacatggagcagctcaagtacgcagaactgcgggcccgccagcagatggagcag
cagcatgggcagaacccacccccagggcaccagcactcgggagggcccggcctggcgccc
ctgggagcagcggggcaccccggcatgatgccccaccagcagcccccgccctaccctctg
atgcagcaccagatgccgccaccccacccaccccagccaggtcagataccaggtccaggt
tccatgatgcctgggcagcccatgccaggccgcatgattcccaccgttgcagccaacatc
cacccccctgggagcggccctccccctcctggaatgccgccaatgccggggagcatctca
ggcccccgggtgaccctcacggcacctaacggcatgtatccccctccgccacagcagccg
ccgccgcctcctgcagatgcagtccctccgcctcctgctccgggcccgcccgcctctgct
gcaccctag

DBGET integrated database retrieval system