Pteronotus mesoamericanus (Parnell's mustached bat): 129088255
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Entry
129088255 CDS
T09558
Symbol
SCN11A
Name
(RefSeq) sodium channel protein type 11 subunit alpha
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ppam04040
]
129088255 (SCN11A)
Ion channels [BR:
ppam04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
129088255 (SCN11A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
Motif
Other DBs
NCBI-GeneID:
129088255
NCBI-ProteinID:
XP_054451476
LinkDB
All DBs
Position
Unknown
AA seq
1774 aa
AA seq
DB search
MDDWYHPVIFPDARNFRPFTSESLAAIEKRIAIQKEKKKLKGQTAAEPQPRPQLDLKASR
KLPKLYGDIPRDLIAKPLEDLDPFYRNHKTFMVLNKKRTIYRFSAKRALFIFGPFNSVRS
LAIRISIHSLFSMFIICTVIINCVFMATAGGKESNATDSNYTYAEYVFTGIYIFEALIKI
LARGFILDEFSFLRDPWNWLDSIVIAIAFLTYSKVQNNGLSSLRTFRVLRALKAISVISG
LKVIVGALLRSVKKLVDVLILTLFCLSIFALVGQQLFMGTLNYKCVNKTCGNTSNFDDSC
FEMKDSEFKLCSIWSEGTCSSQYVCMHTNTNPDYNYTNYDNFGWSFLAMFRLMTQDSWEK
LYRQTLRTSGLFSVFFFVVVIFLGSFYLINLTLAVVTMAYEEQNRNVAAETEAKEKMFQE
AQQLLKAEKEALVAMGIDRSSLNSLEASSFSPKKRKLFGNKKRKSFFFRESGKEQVPGSD
SDEDSQKQPHLLEQTKRLSQNLSVDVSEELGDTFQRQRALSAVSILTITMQQQEKSQEPC
LPCGKSLATKYLIWDCSPRWVSFKKVLRIVMTDPFTELAITICIIINTLFMSLEHHGMSN
SFRSMLNTGNSVFTSIFMAEMFLKIIALDPYHYFRRGWNIFDSIVALLSLADVIIKQPNF
RILRVLRVFKLAKSWPTLNTLIKIIGHSVGALGNLTVVLAIVVFIFSVVGMRLFGSQFCH
FKTKVKSCDAEGSCLRRWHMGDFFHSFLVVFRILCGEWIENMWECMEEANKYMCIIVFVL
IMVIGKLVVLNLFIALLLNSFSNEERDGNLEGEGRKTKVQLALDRFHRAFCFVINTLEQY
CCKRCRRQSSPKQKKVAEGSSAENKDIIPLVAEIKKGPETWEEFGVLTSAPRPLSVGHAQ
TLLAPLAEEEDDDEFLDEENAQTVTQPEAGKQVYELHQEAKSSSPRIQSVEIEVLPEDAA
YLSAQNPRKKSDSISVLSECSTIDLQDPFRWVPESIPQKELDRCFPKGLCRCFPCCAVNR
RKSPWIIWWNLRKTCYQIVKHSWFESFIIFVILLSSGALMFEDINLQDQPKIKELLKFTD
NVFTHIFILEMVLKWVAFGFGKYFTSAWCWLDFIIVIVSVTSLINLKELKSLRILRALRP
LRALSQFEGMKVVVNALIGAIPAILNVLLVCLIFWLIFCILGVNLFAGKFGRCVNETDNK
SILINLNDVNNKNQCISANLTWSNRKVNFDNVGMAYLALLQVATFKGWTDIMQAAVDARK
RDEQPKYENDLRMYIYFVIFIIFGSFFTLNLFIGILIDNFNQQQKKISGQDIFLTDEQKK
YYNAMKKLGSKKPQKPIPRPLNKCQGLVFDLVTSQVFDGIIIIFILLNMVSMMAESYDQP
PEKKSVLEYLNLAFVAIFTIECLIKIFALRQYYFSNGWNLFDCVIVVLSVVSTMISAIEN
NKNIPFPPTLFRIVRLARIGRILRLVRAARGIRTLLFALMMSLPSLFNIGLLLFLVMFIY
AIFGMNLFCKVGPGDGIDEIFNFKTFVGSLLCLFQITTSAGWDSLLKPMLRTEESCEPKV
DDCHLSTKAITYFVSYIIISFLIVVNMYIAVILENFNIATEESEDPLGEDDFEMFYEVWE
KFDPGATQFIKYSVLSDFADALPEPLRVAKPNKFQFLVMDLPMVSGDRLHCLDILFAFTT
RVLGNSSGLDSMKAMMEEKFMEANPFKKLYEPIVTTTKRKEEEKCAAVIQKAFRKYRVKM
TKCALEDRPHSPPQTLCTGDLSGFGVAEGKVHCD
NT seq
5325 nt
NT seq
+upstream
nt +downstream
nt
atggatgactggtaccacccagtgatcttcccagatgcacggaacttccgccccttcact
tctgaatctttggctgcaattgagaagcggattgccatccaaaaggagaaaaagaagctc
aaaggccagacagcagcagaacctcagcctcgacctcagcttgatctaaaggcatccagg
aagttgcccaagctctatggtgacattccccgtgacctgatagcaaagcccctggaagac
ttggacccgttctacagaaatcataagacatttatggtgttgaacaagaagagaacaatc
taccgcttcagtgccaagcgtgccttgttcatttttgggcctttcaactcagtccgaagt
ttagccattagaatctcaatccattcattgttcagcatgtttatcatctgcactgtcatc
atcaactgcgtgttcatggccacggctggtggaaaggaaagcaatgctacggatagcaat
tatacttatgctgagtatgtcttcactgggatttatatttttgaagctttgataaaaata
ttggcaagaggttttattctggatgagttttcttttcttcgagatccatggaactggctg
gactccattgtgattgcaatagcgtttctgacatacagtaaggtccagaacaacggtctg
tcatccctgcgtaccttccgagtgttgagagctttgaaagcaatttcagtaatttctggt
ctgaaggtcattgtgggtgccttgctgcgctctgtgaagaagcttgttgacgtgttgatc
ctgactctcttttgcctcagcatctttgccctggtaggtcagcagctcttcatgggaacc
ctgaactacaaatgtgtcaacaagacctgtggaaacaccagtaactttgacgattcgtgc
tttgaaatgaaagattccgagttcaaattgtgtagcatctggtcggaagggacttgctcc
tctcaatatgtatgcatgcacaccaacacgaatcctgactataactatacaaattatgac
aactttggctggtcttttcttgccatgttccggcttatgacccaagattcctgggagaag
ctttatcgacagaccttgcgtacctcggggctcttctcagtcttcttctttgtggtggtc
atcttcctgggctctttctacctgattaacttaaccctggctgttgtcaccatggcttat
gaggaacagaacaggaatgtagctgctgagacagaggccaaggagaagatgttccaggaa
gcccaacagctgttaaaagcagaaaaggaggctctggttgccatgggaattgacagaagt
tcacttaattccctcgaagcatcatctttttccccaaagaagagaaagctatttggtaat
aagaaaaggaagtccttctttttcagagagtctgggaaagaacaggttccaggatcagat
tctgacgaagattcccaaaaacagccacacctcctagagcaaaccaaacgactgtcccag
aacctgtccgtagacgtctctgaagagcttggagacacttttcaaaggcaaagggcactg
agtgctgtcagcatcctcaccatcaccatgcagcaacaagaaaaatcccaggagccttgc
ctcccgtgtgggaaaagcctggcaaccaaatacctcatatgggactgtagcccccggtgg
gtgagctttaagaaggtcctgagaatcgtgatgaccgacccctttactgagctggccatc
accatctgcatcataatcaacaccctcttcatgtccttggagcatcatggcatgagcaac
agttttcgttctatgctaaatacaggaaattcggttttcactagcatttttatggcagaa
atgtttctaaagatcattgcgcttgatccctaccactactttcgccgaggctggaacatt
tttgacagcatcgttgctcttttgagtcttgcagatgtgatcattaaacagccgaatttc
cgtatcttaagagtgctgagggtcttcaagttagccaaatcttggccaactttaaatacg
ctgattaagattataggccactccgtcggagcccttggaaacctgactgtggtcctggcc
atcgtggtctttattttctcggtagttggcatgcggctgtttggctctcagttctgtcat
tttaaaacaaaagtaaaatcctgtgacgctgaaggctcatgtttacgacgctggcacatg
ggggatttcttccactcctttctggtggtattccgcatcctctgcggggaatggatcgaa
aacatgtgggaatgtatggaagaagctaataagtacatgtgcattattgtctttgtattg
atcatggtgataggaaaacttgtggtactgaacctcttcattgccttgttgctcaattcc
ttcagcaatgaggagagagatggaaacttggaaggagagggcaggaaaaccaaagtccag
ttagccctggatcggttccaccgggctttttgttttgtgataaataccctggagcaatat
tgttgcaagcgatgcaggaggcaaagctcaccaaagcaaaaaaaggtggcagagggctct
tctgcagagaacaaagacatcattcccttggtcgcagagataaaaaagggcccagagacc
tgggaggagttcggtgtactaacttctgcaccaaggcccttgagtgttgggcatgctcag
actctgctggcgccacttgcagaggaagaagatgatgatgaatttcttgatgaagaaaat
gcacagactgtcacacaacctgaggctggaaaacaggtctatgagctccatcaggaggcc
aagtcctccagcccaagaattcaaagtgtggaaattgaagtgttacctgaagatgctgct
tatctgtcagcacagaatccccgaaagaagtctgattctatcagtgtgctctcagaatgt
agcaccattgatctgcaggatccctttaggtgggtacctgaaagtattccccaaaaggaa
ctagacagatgttttcccaaaggcttgtgtcgctgcttcccatgctgtgctgtgaacagg
agaaagtccccctggatcatttggtggaacctgcggaaaacctgctaccaaatagtgaaa
cacagctggtttgagagctttattatctttgtgattctgctgagcagtggagcattgatg
tttgaagatattaaccttcaagatcaacccaaaatcaaagaattacttaaatttactgac
aatgttttcacacacatttttatcctggagatggttctgaaatgggtggcctttggcttt
gggaagtatttcaccagcgcctggtgctggctcgatttcatcatcgtgattgtgtccgtg
accagtctcatcaatttaaaggaattgaaatccctccggattctgcgagcactgaggccc
ctgcgcgcactgtcccagtttgaaggaatgaaggtggtagtaaatgctctcataggtgcc
atacctgccattctgaatgttttgcttgtttgcctcattttctggcttatattttgtatc
ctgggagtaaacttgtttgctggaaaattcggaagatgcgtgaatgaaacagataacaag
tccatattaataaatctgaacgatgttaacaacaaaaatcaatgtataagtgcaaatctc
acctggagcaaccggaaagtcaactttgacaatgtgggcatggcttatcttgccctgctg
caagtggcaacatttaagggctggacagatattatgcaagcagctgttgatgccagaaag
agggacgagcagccaaagtatgagaatgacttaagaatgtacatatactttgtaatcttt
atcatctttggctcattcttcactctgaatctctttattggcattttaattgataacttc
aatcaacagcagaaaaagataagtggccaagacatttttctgacagatgaacagaagaaa
tactataatgcaatgaaaaaactaggatccaaaaaacctcaaaagcctattccaaggcct
ctgaacaaatgccaaggcctcgtgtttgacctggtcacaagccaggtcttcgatggcatc
atcatcatcttcattctcctcaacatggttagcatgatggctgaatcgtatgaccagcct
ccggagaagaagagcgtccttgaatatctcaacctggcctttgtggccatcttcacgatt
gagtgtctcatcaaaatcttcgctttgaggcaatactacttctccaatggctggaattta
ttcgattgtgtgatcgtggttctttctgttgttagtacaatgatttctgccatagaaaac
aataagaacattcctttccctccaaccctcttccgaattgttcgcttggctcggatcggc
agaatcctgaggcttgttcgggcagctcgaggaatcaggactctcctttttgccttgatg
atgtcccttccctctctgttcaacatcggtcttctcctctttctggtgatgtttatttat
gccatttttggtatgaacttattttgcaaagtaggtccgggcgatggaattgatgagata
ttcaactttaagacttttgtaggcagcttgctctgtctcttccagataaccacctcagca
ggttgggattccctcctcaaacccatgctgcgaacagaagagtcatgtgaacccaaggta
gatgactgtcacctctctaccaaagccataacctacttcgtcagttacatcatcatttcc
tttctcattgttgtcaacatgtatattgctgtgattttagaaaacttcaatatagccact
gaagaaagtgaggaccctttgggtgaagatgactttgaaatgttctatgaagtctgggaa
aagtttgatccaggagcaacacagtttatcaaatattctgtcctttctgactttgccgat
gcccttccggagcctttgcgggtggcgaagccaaataagtttcaatttctagtcatggac
ttgcccatggtaagcggagatcgccttcactgtctggatattctcttcgctttcaccact
agggtactcggcaactccagcggcctggacagcatgaaagcgatgatggaggagaagttc
atggaagccaaccccttcaagaagttatatgagcctatagtcaccaccaccaagaggaag
gaagaggagaaatgtgctgctgttatacaaaaggcctttcgaaagtacagggtgaagatg
accaagtgcgccttggaagacaggcctcattcacccccccagacactctgtacaggagac
ttgtccggctttggggtggctgagggcaaggtccactgcgactga
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integrated database retrieval system
