Paracoccus pantotrophus: ESD82_00195
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Entry
ESD82_00195 CDS
T06495
Name
(GenBank) 2'-5' RNA ligase family protein
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
ppan
Paracoccus pantotrophus
Brite
KEGG Orthology (KO) [BR:
ppan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppan03016
]
ESD82_00195
Enzymes [BR:
ppan01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
ESD82_00195
Transfer RNA biogenesis [BR:
ppan03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
ESD82_00195
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
2_5_RNA_ligase2
LigT_PEase
Motif
Other DBs
NCBI-ProteinID:
QFG34695
UniProt:
A0AAE6TUY1
LinkDB
All DBs
Position
2:complement(34991..35560)
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AA seq
189 aa
AA seq
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MQDAAQAQDMQQETPREHFLLFVAIPPPEVAARIEDAWRLANRRDRFRRATLHMTILPVI
RTPQLAPGMAEALGRPLDGLDFPAFDLVLDRLTTFGPPRRRDRPLVLVGRQEHPAPDALC
QALWRRLAHAGLAVARHRVTPHVTLAYGKPLPPEGIAVPPVHWRVDELVLIDSLQGLGRH
VPLARWPLP
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgcaagacgccgcgcaagcgcaggacatgcagcaggaaacgccgcgcgagcatttcctg
cttttcgtcgccatcccgccgcccgaggtcgcggcacggatcgaggatgcctggcggctc
gcgaaccgccgcgaccgcttccgccgcgccacgctgcacatgaccatcctgccggtgatc
cgcaccccgcagctggcgccgggcatggccgaggcgcttggccggccgctggacgggctc
gacttccccgccttcgacctggtgctggaccggctgaccaccttcggcccgccgcgccgg
cgcgaccggccgctggtgctggtcggccggcaggaacaccccgcccccgacgcgctgtgc
caggcgctctggcggcgcctcgcccatgccggcctggccgtcgcccgccaccgcgtcacc
ccgcatgtgacgctggcctatggcaaacccctgccgcccgagggcatcgccgtgccgccc
gtgcattggcgcgtggacgagctggtgctgatcgacagcctgcaggggctgggccggcat
gttccgctggcgcgctggccgctgccctga
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