Paracoccus pantotrophus: ESD82_04540
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Entry
ESD82_04540 CDS
T06495
Name
(GenBank) type III PLP-dependent enzyme
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ppan
Paracoccus pantotrophus
Pathway
ppan00300
Lysine biosynthesis
ppan00470
D-Amino acid metabolism
ppan01100
Metabolic pathways
ppan01110
Biosynthesis of secondary metabolites
ppan01120
Microbial metabolism in diverse environments
ppan01230
Biosynthesis of amino acids
Module
ppan_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ppan00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ESD82_04540
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ESD82_04540
Enzymes [BR:
ppan01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
ESD82_04540
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QFG35452
UniProt:
A0AAE6NUQ7
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Position
2:complement(940809..942047)
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AA seq
412 aa
AA seq
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MCRPLTDLDRHLAEAAARFGTPCYVYATDLVEERLAHLRAHLGRWFAVSFAVKSNPNPAL
LDWMRGRLDCLDISSGGELALAQEAGWDAERISFTGPAKRDAELRAATQAGLGELVLESL
REARLADAIAGELGRVQPVLVRLAPARVPKGFGDQMAGRPSPFGVDVEEAAEILPQIAAL
PNLKIIGLHIYSGTQCLKPEAICENWRIFMQVFADTCAALDLRPEKLIFGAGLGIPYHPG
DSALDLAAIAAEIGPELDAFAARFSATRLVLELGRYLVGPAGWFVTRVVSVKQSRGSRIA
ICDGGLNANLAASGNFGMVLRRNYVMHRVGGDEDGARPEERQDISGPLCTSIDKLGGGVA
LPRLEEGDLIAIHACGAYGPTASPLHFISHPMPAELLLTGGQMRDVTRIRGG
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgtgcagacccttgactgacctcgaccgccacctggccgaggccgcggcgcgtttcggc
acgccctgctatgtctatgccaccgacctggtcgaggaacggctggcgcatctgcgcgcg
catctggggcgctggttcgccgtcagcttcgcggtgaaaagcaacccgaacccggccctg
ctggactggatgcggggccggctggactgccttgacatctcctcgggcggcgagctggcg
ctggcgcaggaggcgggctgggatgcggagcggatcagcttcaccggcccggccaagcgc
gatgccgagttgcgcgccgccacccaggcgggcctgggcgagctggtgctggaaagcctg
cgcgaggcgcggctggccgatgccatcgccggcgaactgggccgcgtgcagccggttctg
gtccgcctggcgcccgcgcgcgtgcccaagggcttcggcgaccagatggccggccggccc
agccccttcggcgtcgatgtcgaggaggcggccgagatcctgccgcagatcgccgccctg
ccgaacctgaagatcatcgggctgcacatctattccggcacgcaatgcctgaaacccgag
gcgatctgcgagaactggcgcatcttcatgcaggtgtttgccgatacctgcgcggctctg
gacctgcgcccggaaaagctgatcttcggcgccggcctgggcattccctaccatcccggc
gacagcgcgctggaccttgccgccatcgccgccgagatcggccccgaactcgacgccttc
gccgcgcgcttttccgcgacccggctggtgctggagcttggccgctacctggtcgggccg
gcgggctggttcgtgacccgcgtcgtctcggtcaagcagtcgcgcggcagccgaatcgcc
atctgcgacggcgggctgaacgccaacctggccgcctcgggcaatttcggcatggtgctg
cggcgcaattacgtcatgcaccgggtcggcggcgacgaagacggcgcccggcccgaggaa
aggcaggacatctccggcccgctctgcacctcgatcgacaagctgggcggcggtgtcgcc
ctgcccaggctggaggaaggcgacctgatcgccatccatgcctgcggcgcctatgggccg
accgccagcccgctgcatttcatcagccatcccatgccggctgagctgctgctgaccggc
gggcagatgcgcgacgtgacgcgaatccggggcggctga
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