Paracoccus pantotrophus: ESD82_05975
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Entry
ESD82_05975 CDS
T06495
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ppan
Paracoccus pantotrophus
Pathway
ppan03420
Nucleotide excision repair
ppan03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ESD82_05975
03430 Mismatch repair
ESD82_05975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppan03400
]
ESD82_05975
Enzymes [BR:
ppan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ESD82_05975
DNA repair and recombination proteins [BR:
ppan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ESD82_05975
MMR (mismatch excision repair)
Other MMR factors
ESD82_05975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
CarD_TRCF_RID
DUF7742
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
QFG35703
UniProt:
A0AAE6NVI6
LinkDB
All DBs
Position
2:complement(1231215..1233629)
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AA seq
804 aa
AA seq
DB search
MSNFDDSDAFEAAAAPVPLSQRAMGARPAPYLDGLNPAQRAAVEALDGPVLLLAGAGTGK
TRALTTRIAHLLNLGRARPGQILAVTFTNKAAREMKDRVGRLLGEMVEGMPWLGTFHSIS
VKILRRHAELIGDGELHLKPSFTILDTDDQIRLLKQLIQAENIDEKRWPARQLAHLIDGW
KNRCLSPAKLPKGEERAFDGWGGRLYAAYQRRLLELNAVDFGDLLMHCVNLFQAHPDVLR
TWQDRFRYILVDEYQDTNVAQYMWLRLLASGHRNICCVGDDDQSIYGWRGAEVGNILRFE
SDFPGAQVIRLEQNYRSTPHILAAASGLIAANKGRLGKTLWTEAEEGERVRLIGHWDSEA
EARWIGEEIEAFHGGHRHSIGRRSLNDIAILVRASHQMRAFEDRFMTIGLPYRVIGGPRF
YERAEIRDAMAYFRLAVSPTDDLAFERIVNVPKRGLGDKAVQKIQIEARERGLSLLEGAA
SAVATGALGGKGAGALRQFTEAMGRWHADALDASVNHVELAERILDESGYTAMWQNDKSP
DAPGRLDNLKELMKALEEFENLQGFLEHVALVMDNDKGEQSEEVSIMTLHAAKGLEYPIV
FLPGWEDGLFPSQRSMDESGMKGLEEERRLAYVGITRGEELVTISFAGNRRMYGQWQSSL
PSRFIDELPEDHVEVLTPPGLYGGGYGAAAQSFGQPFAQSVMHERAARADVYNSPGWKRM
QERSAQRAQPVHRTPVVIDAEPAARFSVGDRVFHQKFGNGTIMGIAEDTLTIQFPTGFKT
VKAGYVQPASQPAQGGGALDDVPF
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatttcgacgactcggacgctttcgaggccgcagccgccccggtgccgctttcc
cagcgtgccatgggcgcgcggccggcgccctatctggacgggctgaacccggcgcagcgc
gccgcggtcgaggcgctggacgggccggtgctgctgctggccggcgccggcaccggcaag
acccgcgccctgaccacgcgcatcgcgcatctgctgaatctcggccgcgcgcgaccgggg
cagatcctggccgtgaccttcaccaacaaggccgcgcgcgagatgaaggaccgcgtcggc
cggcttctgggcgagatggtcgagggcatgccctggctcggcaccttccactcgatcagc
gtcaagatcctgcgccgccatgctgaactgatcggcgacggcgagttgcacctgaagccc
agcttcaccatcctggacaccgacgaccagatccggctgctgaagcaactgatccaggcc
gagaatatcgacgaaaagcgttggccggcgcggcagctggcgcatctgatcgacggctgg
aagaaccgctgcctgtccccggcaaagctgcccaagggcgaggaacgcgccttcgacggc
tggggcgggcggctttacgccgcctatcagcgccggctgctggaactgaacgcggtcgat
ttcggcgacctgctgatgcattgcgtcaacctgttccaggcgcatcccgacgtgctgcgg
acctggcaggaccgtttccgctatatcctcgtggacgaataccaggacaccaacgtcgcg
caatacatgtggctgcggctgctggcgtccgggcatcgcaacatctgctgcgtgggcgac
gacgaccagtcgatctatggctggcgcggcgccgaggtcggcaatatcctgcgcttcgaa
agcgatttccccggcgcgcaggtgatccggctggaacagaactatcgctcgaccccgcat
atcctcgccgccgcctccgggctgatcgcggcgaacaagggccggctcggcaagacgctg
tggaccgaggccgaggagggcgagcgcgtccgcctgatcggccattgggacagcgaggcc
gaggcgcgctggatcggcgaggagatcgaggccttccacggcgggcatcgccacagcatc
ggccggcgcagcctgaacgacatcgccatcctcgtgcgcgccagccaccagatgcgggcc
ttcgaggaccgcttcatgactatcggcctgccctatcgggtgatcggcggtccgcgcttc
tacgagcgggccgagatccgcgacgccatggcctatttccggctggcggtcagccccacc
gacgacctggccttcgagcgcatcgtgaacgtgcccaagcgcggcttgggcgacaaggcg
gtgcagaagatccagatcgaggcgcgggaacgcggcctgtcgctcttggaaggcgccgcc
tcggccgtcgccaccggcgcgcttggcggcaagggggcaggggcgctgcggcagttcacc
gaggcgatgggccgctggcatgccgatgcgctggacgcctcggtgaaccatgtcgagctg
gccgagcgcatcctggacgaatccggctataccgcgatgtggcagaacgacaagtcgccc
gacgcgccggggcggctggacaacctgaaggaattgatgaaggcgctggaggaattcgaa
aacctccagggtttcctcgagcatgtcgcgctggtcatggacaatgacaagggcgagcag
tccgaggaggtcagcatcatgacccttcacgccgccaaggggctggaataccccatcgtc
ttcctgcccggatgggaggacgggctgttccccagccagcgcagcatggacgaaagcggc
atgaaggggctcgaggaggagcggcgcctggcctatgtcggcatcacccgcggcgaggag
ctggtgacgatcagcttcgccggcaaccgccgcatgtatgggcaatggcagtcctcgctg
ccctcgcgcttcatcgacgaactgcccgaggatcatgtcgaggtgctgacgccgcccggc
ctttacggcggcggctatggcgcggcggcgcagtccttcgggcagcccttcgcgcaatcg
gtgatgcacgaacgcgcggcgcgggcggatgtctacaattcgcccggctggaaacgcatg
caggaacgctccgcccagcgggcccagcccgtccaccgcaccccggtagtgatcgacgcc
gagccggcggcgcggttttcggtgggcgaccgggtgtttcaccagaaattcggcaatggc
acgatcatgggcattgccgaggacacgctgaccatccagttccccaccggtttcaagacg
gtgaaggcgggctatgtgcagcccgcctcgcagcccgcccaggggggcggcgcactggac
gacgtgccgttctaa
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