Paracoccus pantotrophus: ESD82_12710
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Entry
ESD82_12710 CDS
T06495
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
ppan
Paracoccus pantotrophus
Brite
KEGG Orthology (KO) [BR:
ppan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppan03019
]
ESD82_12710 (hrpB)
Enzymes [BR:
ppan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
ESD82_12710 (hrpB)
Messenger RNA biogenesis [BR:
ppan03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ESD82_12710 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
DEAD
Helicase_C
CON_HrpB
HA2_N
AAA_19
ResIII
Motif
Other DBs
NCBI-ProteinID:
QFG37041
UniProt:
A0A1I5F2L2
LinkDB
All DBs
Position
1:466218..468626
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AA seq
802 aa
AA seq
DB search
MQLPIDAVLPDLTAALAAHGRAVLMAPPGAGKTTRVPLALLPAISGRILMLEPRRLAARA
AAERMAETLGEPLGRTVGYRIRGEAVAGTRIEVVTEGILTRMIQSDPELSGIGCVIFDEF
HERSLNADLGLALAWEARGALRPDLALLVMSATLDAEPVAALMEGAPVIRSEGRAFPVET
RWLDRPLPAGARLVSEAARLITQAEAATRDTGGTILAFLPGEGEIRRVQAMLDVDAEVLP
LYGAMDFKAQRAALQPPGGRRRIVLATAIAETSLTIPDVKVVVDAGRARRARFDPGSGMS
RLVTERVSRAEAEQRRGRAGRVAPGICYRMWARAEEGALPAFAPPEIAVADLAGLALELA
IWGSDGRDLAFLTPPPEAALSEARALLRDLGALDGDNRITPHGRRLAPLPLHPRLAHMLV
TAGREAADLAALMAERDPLTGAPADLTLRLAAIRDLRAYQDRHPWPANPGTLHRIRDEAK
RLRRMAGEGAGLSPGAMAALAYPDRIGLRRKGEQPRYVLSGGKGAVLPEGDALAAQRLIV
ATDLDGDAREARIRMAVAVDEDEIRALFPDRIETVELVEWSRRDSRVLARRQERLGALVL
ADRALDDPDPQALARAAFEGLRATGLTWSPGAARLRARVALIPELGPVDDESLLADPDWL
LPWLGKVRTLADLRGLDLSEALKARIGWDGQRRLDQAAPAHFVTPLGRRVPIDYDHETPS
VELKLQELFGLSRHPVVGNRPLRITLLSPGGKPVAVTTDLPGFWAGGYGDVRKDMRGRYP
RHPWPENPLEADPTTRAKPRGT
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgcagttgcccatcgacgccgtattgcccgacctgaccgccgcgctggccgcgcatggc
cgtgccgtgctgatggcgccgcccggcgccggcaagaccacccgcgtccccctggcgctg
ctgcccgcgatttccggccgcatcctgatgctggagccgcgccgccttgccgcccgcgcc
gcggccgagcgcatggccgagacgctgggcgagcccttgggccgcaccgtcggctatcgc
atccgcggcgaggcggtggcgggcacccgcatcgaggtggtgaccgagggcatcctgacc
cggatgatccagtccgaccccgagctttccggcatcggctgcgtgatctttgacgaattc
cacgagcgcagcctgaacgccgaccttggcctggccctggcctgggaggcgcggggggcg
ctgcggcccgacctggcgctgctggtgatgtcggcgacgctggatgcagagccggtcgcg
gcgctgatggagggcgcgccggtcatccgctcggaaggtcgcgcctttccggtcgagacg
cgctggctggaccgccccctgcccgcgggcgcccggctggtctccgaggcggcgcggctg
attacccaggccgaggcggcgacgcgcgacaccggcggcaccatcctggccttcctgccg
ggcgagggcgagatccgccgcgtccaggccatgctggacgtcgatgccgaagtgctgccg
ctttacggcgccatggatttcaaggcgcagcgcgccgccctgcaacccccgggcgggcgg
cggcggatcgtgctggcgaccgcgatcgcggaaacctcgctgaccattcccgacgtgaag
gtggtggtcgatgccggccgggcgcggcgggcgcgcttcgatcccggctcgggcatgtcg
cggctggtgaccgagcgcgtcagccgcgccgaggccgagcagcgccgcggccgtgccggc
cgcgtcgcgccgggcatctgctatcggatgtgggcgcgggccgaagaaggcgcgctgccc
gccttcgccccgcccgagatcgccgtggccgacctggccgggctggcgctggaactggcg
atctggggctcggacgggcgcgacctcgccttcctgacgccgccgcccgaggcggcgctc
tccgaggcgcgggcgctcttgcgcgacctcggcgcgctggacggggacaaccgcatcacc
ccgcacggccggcgtctggcgccgctgccgctgcatccgcgactggcgcatatgctggtc
acggccgggcgcgaggccgccgacctcgccgcgctgatggccgagcgcgacccgctgacc
ggcgcacccgccgacctgaccctgcggctggcggcgatccgcgacctgcgcgcctatcag
gaccgccacccctggccggccaaccccggcacgctgcaccgcatccgcgacgaggcgaaa
cgcctgcgccgcatggcgggcgagggcgccggcctgtcgccgggcgccatggccgcgctg
gcctatcccgaccgcatcgggctgcgccgcaagggcgagcagccgcgctatgtgctgtcg
ggcggcaagggcgcggtgctgcccgagggcgacgcgctggccgcacagcgcctgattgtc
gcgaccgaccttgacggcgatgcgcgcgaggcccgcatccgcatggcggtggcggtggat
gaggacgagatccgcgccctgttccccgaccgcatcgagaccgtcgagctggtggaatgg
tcccgccgcgacagccgcgtccttgcccgccggcaggaacgccttggcgcgctggtgctg
gccgaccgggcgctggacgatcccgacccgcaggcgctggcccgcgccgccttcgagggg
ctgcgcgcgaccgggctgacctggagccccggcgccgcgcggctgcgggcacgggtcgcg
ctgatcccggaactcggcccggtcgatgacgaaagcctgcttgccgatcccgactggctg
ctgccctggctgggcaaggtgcggaccctggccgacctgcgcgggctggacctgagcgag
gcgctgaaggcgcgcatcggctgggacggccagcgccggctggatcaggcggcgccggcg
catttcgtcacgccgctgggccgcagggtgcccatcgactacgaccacgagacaccctcg
gtcgagctgaagctgcaggaactgttcggcctgtcgcgccatccggtggtcggcaaccgg
cccttgcgcatcaccctgctgtcgcccggcggcaagcccgtcgcggtgaccacggacctg
ccgggtttctgggccgggggttacggcgatgtccgtaaggacatgcgcggccgctatccg
cgccatccctggccggaaaacccgctggaagccgacccgaccactcgcgccaagccgcgc
ggaacctga
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