Paracoccus pantotrophus: ESD82_18390
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Entry
ESD82_18390 CDS
T06495
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
ppan
Paracoccus pantotrophus
Pathway
ppan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ESD82_18390 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppan03400
]
ESD82_18390 (ruvB)
Enzymes [BR:
ppan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ESD82_18390 (ruvB)
DNA repair and recombination proteins [BR:
ppan03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ESD82_18390 (ruvB)
RecFOR pathway proteins
ESD82_18390 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_22
AAA_3
AAA_16
RNA_helicase
AAA_14
AAA_2
TsaE
Rad17
AAA_33
AAA_17
AAA_28
nSTAND3
AAA_18
Bac_DnaA
AAA_24
ABC_tran
Cytidylate_kin
NB-ARC
NACHT
NPHP3_N
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QFG38029
UniProt:
A0A1I5JN63
LinkDB
All DBs
Position
1:1596349..1597374
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AA seq
341 aa
AA seq
DB search
MSQPDPMLRPEPLDSDGEDRALRPQRLEDFVGQAEARANLRVFIESARMRGKAMDHTLFH
GPPGLGKTTLAQIMARELGVNFKMTSGPVLARAGDLAAILTNLEARDVLFIDEIHRMNPA
VEEILYPAMEDFELDLVIGEGPAARTVRIELQPFTLVGATTRLGLLTTPLRDRFGIPTRL
QFYTVEELDLIVTRGARLMGIPSEPEGTREIARRARGTPRIAGRLLRRVVDFALVEGDGR
LSRQIADSALTRLGVDHLGLDMADRRYLALMAEHYGGGPVGVETLSAALSESRDSIEEVI
EPYLMQQGLVSRTPRGRMLARLGWRHLGLDAPRPQESLFDE
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgagccagcccgaccccatgctgcgccccgaaccgctggacagcgacggcgaggaccgc
gccctgcgcccgcagcggctcgaggatttcgtcggccaggccgaggcgcgggcgaacctg
cgcgtcttcatcgaaagcgcccgcatgcgcggcaaggcgatggaccacacgctgttccac
ggcccgcccggcctgggcaagaccacgctggcgcagatcatggcgcgcgagctgggggtg
aacttcaagatgacctccggcccggtgctggcgcgggcgggcgaccttgccgcgatcctg
accaatctggaagcccgcgacgtgctgttcatcgacgagatccaccgcatgaacccggcg
gtcgaggagatcctctatccggcgatggaggatttcgagctggacctggtgatcggcgag
ggccccgccgctcgcacggtgcggatcgagctgcaaccctttaccctggtcggcgccacc
acccggctcggcctgctgaccacgcccctgcgcgaccgcttcggcattccgacccgcctg
caattctataccgtcgaggaactcgacctgatcgtgacccgcggcgcccggttgatgggt
atcccctcggagcccgagggcacgcgcgagatcgcccgccgcgcccgcggcacgccgcgc
atcgccggccggctcttgcgccgggtggtggatttcgcgctggtcgaaggcgacggcagg
ctgagccgccagatcgccgattccgccctgacccggcttggcgtcgatcacctgggcctc
gacatggccgaccgccgctacctggcgctgatggccgagcattacggcggtggcccggtc
ggggtggaaaccctttcggccgcgctgtcggaaagccgcgattccatcgaggaggtgatc
gagccttacctgatgcagcagggcctggtcagccgcaccccgcgcggccgcatgctggcc
cggctgggctggcgccatctgggcctcgatgccccccgcccccaggagagcctgttcgat
gaatga
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