Paracoccus pantotrophus: ESD82_21320
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Entry
ESD82_21320 CDS
T06495
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ppan
Paracoccus pantotrophus
Pathway
ppan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ESD82_21320 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppan03021
]
ESD82_21320 (rho)
03019 Messenger RNA biogenesis [BR:
ppan03019
]
ESD82_21320 (rho)
Transcription machinery [BR:
ppan03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ESD82_21320 (rho)
Messenger RNA biogenesis [BR:
ppan03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ESD82_21320 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
NACHT
AAA_22
OB_RNB
ATPase_2
AAA_25
AAA
Fungal_virus_P2_C
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
QFG38545
LinkDB
All DBs
Position
1:complement(2182389..2183660)
Genome browser
AA seq
423 aa
AA seq
DB search
MTEERLNLSDLKAKSPADLLAMAEEWEIENASTMRKGEMMFSILKEHAEEGFEIGGDGVL
EVVQDGFGFLRSPEANYLPGPDDIYVSPDMIRQHSLRTGDTVEGVIRAPGENERYFALTK
VEKINFENPEKARHKVAFDNLTPLYPNERLKMEIEDPTIKDRSARIIDLVAPIGKGQRSL
IVAPPRTGKTVLLQNIAHSIEKNHPECYLIVLLIDERPEEVTDMQRSVKGEVISSTFDEP
ASRHVAVSEMVIEKAKRLVEHKRDVVILLDSITRLGRAFNTVVPSSGKVLTGGVDANALQ
RPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRVF
PAMDILKSGTRKEELLVDAKDLQKTYLLRRILNPMGTTDAIEFLISKLKQTKTNSEFFDS
MNA
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagaacgtctcaacctgtccgatctcaaggccaagagcccggccgatctgctg
gccatggccgaggaatgggagatcgagaacgcctcgaccatgcgcaagggcgagatgatg
ttctcgatcctcaaggaacatgccgaggagggcttcgagatcggcggcgacggcgtgctg
gaggtggtccaggacggtttcggtttcctgcgctcgcccgaggcgaactacctgccgggt
cctgacgacatctatgtcagccccgacatgatccgccagcacagcctgcgcaccggcgac
acggtcgagggcgtgatccgcgcgccgggcgagaatgagcgttatttcgccctgaccaag
gtcgagaagatcaatttcgagaatcccgaaaaggcccgccacaaggtcgccttcgacaac
ctgacgccgctttaccccaatgagcggctgaagatggagatcgaggatccgaccatcaag
gaccgttccgcccggatcatcgacctggtggcgccgatcggcaagggccagcgttcgctg
atcgtggcgccgccacgcaccggcaagaccgtgctgctgcaaaacatcgcccattcgatc
gagaagaaccatccagagtgctatctgatcgtgctgctgatcgacgagcggccggaagag
gtgacggacatgcagcgttcggtgaagggcgaggtcatttcctcgaccttcgacgaaccc
gccagccgccatgtcgccgtttcggaaatggtgatcgaaaaggccaagcgcctggtcgag
cataaacgagatgttgttatccttctggattctatcacaagacttggtagggccttcaac
accgtggtgcccagttcgggcaaggtgctgaccggcggcgtcgatgcgaatgccttgcag
cgtccgaagcggttctttggcgcggcgcgcaacatcgaggaaggcggttcgctgaccatc
atcgccacggcgctgatcgataccggctcgcgcatggacgaggtgatcttcgaggaattc
aagggcaccggcaacagcgagatcgttctggaccgcaaggtggccgacaagcgcgtgttc
ccggcgatggacatcctcaagtccggcacccgcaaggaagaactgctggtggatgccaag
gatctgcaaaagacctatctgctgcggcgcatcctgaacccgatgggaaccacggatgcg
atcgaattcctgatctcgaagctgaagcagaccaagaccaacagcgaattcttcgattcg
atgaacgcctga
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integrated database retrieval system
