Pseudomonas phytophila: K3169_00435
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Entry
K3169_00435 CDS
T09747
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ppao
Pseudomonas phytophila
Pathway
ppao03030
DNA replication
ppao03410
Base excision repair
ppao03420
Nucleotide excision repair
ppao03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K3169_00435 (polA)
03410 Base excision repair
K3169_00435 (polA)
03420 Nucleotide excision repair
K3169_00435 (polA)
03440 Homologous recombination
K3169_00435 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppao03032
]
K3169_00435 (polA)
03400 DNA repair and recombination proteins [BR:
ppao03400
]
K3169_00435 (polA)
Enzymes [BR:
ppao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K3169_00435 (polA)
DNA replication proteins [BR:
ppao03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
K3169_00435 (polA)
DNA repair and recombination proteins [BR:
ppao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
K3169_00435 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K3169_00435 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
Obc1_cap
Motif
Other DBs
NCBI-ProteinID:
UXZ96422
LinkDB
All DBs
Position
88529..91291
Genome browser
AA seq
920 aa
AA seq
DB search
MSQAPLVLVDGSSYLYRAFHALPPLATSKGLPTGAVKGVLNMLKSLRRQYPDSPFAVVFD
AKGGTFRDDLYAEYKANRPSMPDDLRVQIDLLHACVKGLGYPLLCVDGVEADDVIGTLAR
SSAAADRPVIISTGDKDMAQLVDGHITLVNTMTGSVQDVAGVKEKFGVGPEHIIDYLALM
GDKVDNIPGVPGVGEKTAVGLLVGVGGGLKELYENLEMVATLPIRGAKTLAAKLEEHRAM
AFLSYELATIKIDVPLDIELDQLHCTEPDREALLELYAELEFKSWIEDLHRDAKRVGLEI
AIEEAPAPAESRYETILEQSQLDVWLKKLNGAKLVAFVTQSNGLDAQRAQLVGLSFAVQA
HEAAYIPLTHSYMGVPQQLDRDHVLKQLKPLLEDPSKIKVGQHAKFDINILANCAIDGDQ
SQGIEVQGLLYDTMLESYVLDSTATRHDRESLALKYLGHAAGNIQDIAGKGVKQLTFDQI
SLELAAQYAAQEADITLRLHEALQAKLAAIPSLAPVLNEIEMPLVPVLAGIERQGALVDA
KLLGIQSVELGDKMVALEREAFEIAGEEFNLGSPKQLGVILYEKLGMPVLSKTAKGQAST
AEAVLAELAEQGFPLPTVLMKYRSMSKLKSTYTDRLPEQINPRTGRIHTSYHQAVAVTGR
LSSSDPNLQNIPIRTAEGRRIRQAFVAPKGYKLLAADYSQIELRIMAHLAKDEGLLHAFR
NDLDVHRATAAEVFGVELEAVTTDMRRSAKAINFGLIYGMSAFGLAKQIGVDRKQSQAYV
DRYFARYPGVLDYMERTRTQAAEQGFVETIFGRRLYLPDINAKNQALRKGAERMAINAPM
QGTAADIIKKAMVAVNGWLETSKLDARVILQVHDELVLEVREDLVEQISEQIRPHMSGAA
QLDVPLLVEVGVGNNWDEAH
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagctcccctcgtcctggtggacggttcttcttatctgtaccgcgcttttcat
gcgctgccgccgctcgccacgtccaagggtttgcccacgggtgccgtgaagggcgttctg
aatatgctcaaaagtctgcgtcggcaatacccggacagcccgttcgcggtggtgttcgac
gccaaaggcggtacgttccgagacgacctgtacgccgagtacaaagccaaccggccaagc
atgccggacgatttgcgcgtgcagatcgatctgctgcacgcctgtgtgaaaggtttgggc
tacccgttgctgtgcgttgacggcgtcgaagctgacgacgtcatcggcacactggcgcgc
agcagcgccgcagcggaccgaccggtaatcatttccaccggcgacaaggacatggcgcag
ttggtcgacgggcacatcacgctggtcaacaccatgaccggcagcgtccaggacgtggcg
ggcgtgaaagagaaattcggcgtcggccctgagcacatcatcgattacctggcgctgatg
ggcgacaaggtcgataacattccaggcgtgccgggcgttggcgaaaagaccgccgtaggc
ctgttggtcggtgtgggcggcggcctgaaagagctttacgaaaacctcgaaatggtcgca
acgctgccgatccgtggcgcgaaaaccctggctgccaaactcgaagagcaccgggcgatg
gcgttcctgtcttacgagctggcgaccatcaagatcgacgtcccgctggatatcgagctg
gatcaactgcactgcaccgagcctgatcgtgaagcgctgcttgagctttacgccgagctg
gaattcaaaagctggatcgaagacctgcaccgtgatgccaagcgtgttggtctggaaatc
gccatcgaagaagctcctgccccggcagagtcccgctacgaaaccatccttgagcagagc
cagctcgacgtttggctgaaaaagctcaacggcgccaagctggtggcgtttgtgacccag
agcaacggcctggacgcccagcgtgcgcaactggtgggcttgtcgtttgccgtgcaggcg
cacgaagccgcttacatcccgctgacccactcctacatgggcgtgccgcagcaactggat
cgtgatcacgtactcaagcagctcaaaccgctgctggaggacccgagcaaaatcaaagtc
ggtcagcacgccaagttcgatatcaatatcctcgctaactgcgccattgatggcgatcag
agtcagggcattgaagttcaggggctgctgtacgacaccatgctcgaatcctacgtgctg
gattccaccgctacccgtcatgaccgcgaaagcctcgcgctgaaatacctggggcatgcc
gccgggaatattcaggacattgctggcaagggcgtgaagcaactgacgttcgaccagatt
tctctggagctggctgcgcaatacgcagctcaggaagctgatataacgctgcgcttgcac
gaagcgcttcaggcgaagctcgctgcgatccctagcctggccccggtgctcaatgaaatt
gaaatgccgctggtgcccgttttggcgggtatcgaacgccagggtgcgctggtggatgcc
aagctgctgggcattcagagcgttgagctgggcgacaagatggttgcccttgagcgcgag
gcgttcgagattgcaggggaggaattcaatctgggatcgccgaagcagttgggcgtgatc
ctgtatgaaaaactcggcatgccggttctgagcaagactgccaaaggccaggcctcgact
gccgaagcggtgctcgctgaattggccgaacaaggttttccgctgccaacggtgttgatg
aagtaccgctcgatgagcaagctcaagagcacttacaccgaccgcttgccagagcagatc
aacccgcgcaccggtcgcattcacacctcctaccatcaggcggtggcggtgaccgggcgc
ttgtcttccagtgatccaaaccttcagaacatcccgatccggaccgccgaaggacgccgc
attcgtcaggcgtttgtcgcacccaagggctacaaactgctggcggcggactactcgcag
atcgagctgcgcatcatggctcacctggctaaggatgaaggtttgctacacgcgtttcgt
aatgacctggacgttcaccgggcaacggcggcagaagtgttcggcgttgagcttgaggca
gtaaccaccgacatgcgccgcagtgccaaggcgattaacttcggccttatctacggcatg
agcgcttttggtctggccaagcagatcggtgttgatcgcaagcagtctcaggcctatgtg
gatcgctatttcgcccgttacccgggcgtgctggattacatggagcgcactcgcacgcag
gccgctgaacagggtttcgtagagaccatcttcggccgtcgtctgtatttaccggacatc
aacgccaagaaccaggccttgcgcaaaggcgccgagcgcatggcaatcaacgcgccgatg
cagggcacggcggcagacatcatcaagaaggctatggtggcggtaaacggctggctggag
acgtcgaagcttgacgccagagtcatcctgcaggttcacgatgaactggtactggaggtt
cgcgaagacctcgtcgagcagatcagcgagcaaatccgcccgcacatgagcggcgcggct
cagctggatgttccgttgctggtcgaggtcggtgtgggcaataactgggacgaggcgcac
tga
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