Pseudomonas phytophila: K3169_00620
Help
Entry
K3169_00620 CDS
T09747
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ppao
Pseudomonas phytophila
Pathway
ppao00300
Lysine biosynthesis
ppao00470
D-Amino acid metabolism
ppao01100
Metabolic pathways
ppao01110
Biosynthesis of secondary metabolites
ppao01120
Microbial metabolism in diverse environments
ppao01230
Biosynthesis of amino acids
Module
ppao_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ppao00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
K3169_00620 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
K3169_00620 (lysA)
Enzymes [BR:
ppao01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
K3169_00620 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
UXZ96459
UniProt:
A0ABY6FFJ3
LinkDB
All DBs
Position
129807..131054
Genome browser
AA seq
415 aa
AA seq
DB search
MDAFNYRDGELFAEGVALSAIAERFGTPTYVYSRAHIEAQYNAYADALSGMPHLVCYAVK
ANSNLGVLNVLARLGSGFDIVSRGELERVLAAGGKAERIVFSGVGKTRDDMRRALEVGVH
CFNVESTDELERLQIVAAEMGVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIADAED
VYIRAAQLPNLEVIGVDCHIGSQLTTLEPFIDALDRLLALVDRLCDCGILLSHIDLGGGL
GVRYRDEEPPLASDYIKAVRERMEGRDLSLVFEPGRFIVANAGVLLTQVEYLKHTEHKDF
AIVDAAMNDLIRPALYQAWMDVTAVRPRDSAPRAYDIVGPICETGDFLAKGRELALAEGD
LLAVHSAGAYGFVMSSNYNTRGRTAEVLVDGSQAFEVRRRETVAELFAGESLLPE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggacgccttcaactaccgcgatggtgagctgttcgcggaaggtgtagcgttgtctgcc
attgccgagcgtttcggcacgccgacctacgtctactcccgcgctcacatcgaagcgcaa
tacaacgcctatgctgatgccctgagcggtatgccgcacctcgtctgctacgccgtcaaa
gccaattccaacctgggcgtgctcaacgtactggcgcgtctgggttcaggcttcgacatt
gtttcccgtggcgaactggagcgagtgctcgctgcaggcggcaaagcagaaaggatcgtg
ttttcaggggtcggcaagacccgtgatgacatgcgccgcgcgctggaagtgggcgtgcac
tgcttcaacgtcgagtccaccgacgagcttgagcgtctgcagattgtcgcggccgaaatg
ggcgttcgtgccccgatctcgctgcgcgtcaatccggacgtcgatgctggcacgcatccg
tacatctccaccggcctcaaggaaaacaaattcggcatcgccatcgctgatgctgaagac
gtctacatccgcgctgcacagttgccgaatctggaagtcatcggcgtcgattgtcacatc
ggctcgcaactgaccacgcttgagccgttcattgacgcgcttgatcgcctgctcgcgctg
gtggatcgtctttgcgattgcggcatcctgctgagccacatcgatctgggtggcggtctt
ggcgtgcgttatcgcgatgaggagccaccgctggcttcggattacatcaaggccgtgcgt
gagcggatggaaggtcgtgacctgtcactggttttcgaacccggccgcttcatcgttgcc
aacgcgggcgtgctgctgactcaggtcgagtacctcaagcataccgagcacaaggatttc
gccatcgtcgatgcggcgatgaacgacctgattcgcccggcgctgtatcaggcctggatg
gacgtcactgccgttcgcccacgtgacagcgcgcctcgcgcctacgacatcgtcgggccg
atctgcgaaaccggcgatttcctcgccaagggccgcgaactggctctggctgaaggtgat
ctgctggccgtgcattcggccggtgcctacggttttgtcatgagctcgaactacaacacc
cgcggtcgcaccgctgaagtgttggtcgacggctcgcaggctttcgaagtacgccgccgc
gagaccgtggccgagctgtttgctggcgaaagcctgctgccggagtaa
DBGET
integrated database retrieval system