Pseudomonas phytophila: K3169_00625
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Entry
K3169_00625 CDS
T09747
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ppao
Pseudomonas phytophila
Pathway
ppao00300
Lysine biosynthesis
ppao00470
D-Amino acid metabolism
ppao01100
Metabolic pathways
ppao01110
Biosynthesis of secondary metabolites
ppao01120
Microbial metabolism in diverse environments
ppao01230
Biosynthesis of amino acids
Module
ppao_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ppao00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
K3169_00625 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
K3169_00625 (dapF)
Enzymes [BR:
ppao01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
K3169_00625 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
UXZ96460
UniProt:
A0ABY6FEX1
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Position
131058..131888
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AA seq
276 aa
AA seq
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MLLRFTKMHGLGNDFMVLDLVSQHAHILPKHAKQWGDRHTGVGFDQLLLVETPTNPDVDF
RYRIFNSDGSEVEQCGNGARCFARFVLDKRLTAKRLIKVETKSGIIELEIRNDGQISVDM
GPPRLVPADIPFQATEQALSYSVDVDGQTVELAAVSMGNPHAVLRVDDINNAPVHALGPK
IEHHPRFPARVNVGFLYVVDRQRAQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPL
LIDLPGGRLSIEWAGPGHPVLMTGPAVRVYEGQVRL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgcgttttaccaagatgcatggcctgggcaacgacttcatggttttggacctg
gtcagccagcacgcgcatattttgcccaagcacgccaaacaatggggtgaccggcacacc
ggcgtcggtttcgatcagctgttgctggttgagaccccgaccaatccggatgtcgatttc
cgctaccggattttcaactccgatggttccgaggttgagcagtgcggcaatggtgcccgc
tgctttgcgcgtttcgtgctggacaagcgtttgaccgccaagcgcctgatcaaggtcgaa
accaaaagcggaattattgagctggaaatccgcaatgacgggcagatcagcgtcgatatg
gggccgccacggctggtcccggcggacatcccgtttcaggccaccgagcaggcattgagc
tacagcgtcgacgttgacggccagacggtcgagctggccgcggtgtccatgggcaacccc
catgcggtgttgcgcgtggacgacatcaacaacgcgcccgtgcatgcactgggtccgaaa
attgaacaccatccgcgctttccggcgcgggtcaacgtaggctttctctacgtcgtcgat
cgtcagcgtgcgcaattgcgtgtctgggagcgcggagccggggaaacccaggcctgtggt
actggtgcgtgtgcggcagccgttgcggcgatcagccagggctggatggattcgcctctg
ctgatcgatctgccgggtggacgtctgtctatcgagtgggctggtccgggccatccggtc
ctgatgaccggtcccgctgtacgggtctatgaaggccaggttcgtctatga
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