Pseudomonas phytophila: K3169_00985
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Entry
K3169_00985 CDS
T09747
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
KO
K11891
type VI secretion system protein ImpL
Organism
ppao
Pseudomonas phytophila
Pathway
ppao02025
Biofilm formation - Pseudomonas aeruginosa
ppao03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ppao00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
K3169_00985 (tssM)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
K3169_00985 (tssM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppao02044
]
K3169_00985 (tssM)
Secretion system [BR:
ppao02044
]
Type VI secretion system
Imp/Vas secretion system core components
K3169_00985 (tssM)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
IcmF-related_N
IcmF-related
IcmF_C
IcmF_helical
nSTAND_NTPase5
DUF2383
Motif
Other DBs
NCBI-ProteinID:
UXZ96527
UniProt:
A0ABY6FF70
LinkDB
All DBs
Position
complement(211108..214614)
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AA seq
1168 aa
AA seq
DB search
MKAFFGFFIRWIVPVLGLIALSLIIWFVGPLLEALVPEGRRWALIILLFAAWLAYRVFRI
VQARRQAAKVMQSLAAQEVPDPASVATAEELATLRQRMDEALTLLKKARLGGDERRNLYE
LPWYVIIGPPGSGKTTALVNSGLHFPLAAQMGAGAIRGVGGTRNCDWWFTDQAVLLDTAG
RYTTQDSHAQVDKAAWLGFLDLLKNQRSRRPIDGAFIAISLSDLLLGTDAEREAHAVAIR
ARIQELYTQLGVRFPIYLMLTKLDLVPGFMEFFDALSKEEREQVWGMTFALDDGKNAQGP
LAEFLSEFALLEQRINARLVERLQQERDPARRDLIYGFPQQFGALKDCLQSFLDGVFKPN
AYEDRALLRGVYFTSGTQEGSPIDRLIGAMAQSMSLDRQHLARQSGTGRSYFIHKLFTAV
AFAERGLVGVNPKVEQRRKWIARGVLAATIAVVLTVSALWWVSYRANQAYIAQVDQKVAP
LGQSVQNLSPAQRDVLAVLPLLNAVKHLAGDAPDWSEGLGLYQGDMLEAESGSVYRKLLI
AVFAPRLVTRIEEQLHSGGSSDYLYEGLKAYLMLADNEHYDPDFIKAWIALDWDQNLPRD
LPPEQRQQLGEHLQALFERHPPNARLDQRLIDDLRRQLQQLPVAQRVYDRVKRHKLPEGV
ADFRLSEAAGRDAPLVFARKSGKPLGDPLSGFFTAKGYREAFLATSLTQAGTLSEEQWVL
GRDQADQQNVASLAADVRRLYFQDYLRNWDALLADIDFVPITSVAQAADVLRVLSGPSSP
LKKLLVAVAKETDLQQEEKLLAAQGKKVDGNVDQLKQKLGSLLGQEQPASNTATPVSSED
PVSAHFAELNSLVSKGEGEPAAIDGLLADMNALYVQVSAMVGASGDALLGEAKNSATAAA
QRVSLTAERQPPLVQGLVKSVVSSTTNTMMGGVRNQLNAAWVSEVVNVYRQSLSGRYPLS
PGSNRDATLDDFGQFFGVGGVMDNYFRRYLQPYVDTSASTWRWQPGAAQKLGINAGVLQT
FQRAAAIRDAFFRSGGTQPMVRFELKPVAMDASITQFLLDLDGQQISYDHGPSRPVAMQW
PNAGSIGVVRMSISPPSASGRSAITLDGPWAWFRLLEQSDLVAGSSPDRFNLRLRVDSAS
ISYELRANSAFNPFKSRVLSGFSLPERL
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggcgtttttcggttttttcattcgctggatcgtcccggttctgggcctgatcgcg
ttaagtctgattatctggtttgtcggtccgttactcgaagccctggtgccggaaggccgt
cgctgggcgctgatcatcctgctgttcgcggcgtggctcgcgtaccgggtatttcgcatc
gttcaggcgcgtcgtcaggccgccaaggtcatgcaaagcctggctgcgcaagaggttcca
gacccggccagtgtcgccacggcagaagaactcgccaccttgcgccaacgcatggacgaa
gcgctgacactgctcaagaaggcccgcctgggcggcgatgagcgacgcaatctgtacgag
ctgccgtggtacgtgatcatcggcccgccgggttcgggcaagaccactgcgctggtcaat
tccggtctgcattttccgctggcggcgcagatgggtgcgggcgcgattcgcggtgtgggc
gggacgcgtaactgcgactggtggttcaccgatcaggccgtcttgctcgacaccgccggg
cgctataccactcaggacagccatgcgcaggtcgataaagccgcgtggctgggctttctg
gacctgctgaaaaatcagcgttcgcggcgtcctatcgacggcgctttcattgccatcagt
ctgtctgacctgttgctcggcactgatgctgagcgtgaggcgcatgccgttgcaatccgc
gcgcgtattcaagagctgtatacccagctcggcgtgcgtttcccgatctacctgatgctg
acaaagctggatctggtgcctggcttcatggagttcttcgatgccttgagcaaagaagag
cgggagcaggtctgggggatgacctttgccctcgacgatgggaagaacgcgcaaggtccg
ctggctgaatttctcagtgaattcgccctgctggagcaacgaatcaacgcacgtctggtg
gagcgcttgcagcaggagcgggatccggcgcggcgcgatttgatctacggcttcccccag
caattcggcgcgttgaaagattgtctgcaaagcttcctggacggggtattcaaacccaac
gcctacgaagaccgtgctttgctgcgtggggtgtacttcaccagcggcacccaggaaggc
agcccgattgaccgcctgatcggcgccatggcccaaagtatgagcctggaccgccagcat
ctggcgcgccagagcggcaccgggcgcagttatttcatccacaagctgttcaccgccgtg
gcgtttgccgagcggggactggtgggcgtcaacccgaaagtcgaacagcgccgcaaatgg
atcgcccgcggggttctggcagcgaccatcgcggtggtgctgacggtcagtgcattgtgg
tgggtcagttatcgcgccaaccaggcgtacatcgctcaggtcgatcagaaggtcgcgcct
ttgggccaaagcgtacaaaacctgagcccggcacaacgcgatgtgctggcggtattgcca
ttgctcaatgcggtcaagcatctggcaggtgacgcaccggactggtctgaggggctgggg
ctttatcaaggcgacatgcttgaggcagagtccggcagcgtctatcgcaaactcctcatc
gcggtcttcgcaccacgcctggtgacgcgcattgaagagcaactgcacagcggtggcagt
tccgattacctgtacgaaggtctgaaggcctacctgatgctcgccgacaacgagcattac
gaccctgacttcatcaaggcatggatcgctctggactgggaccaaaacctgccccgcgac
ctgccgccggaacaacgccagcaattgggtgaacatctgcaggcgctgttcgagcgccac
cctcctaacgcacgcctggaccagcgcctgatcgacgacctgcgccgccaactgcaacag
ttgcccgttgcgcaacgcgtttatgaccgggtcaagcggcacaaactgcccgaaggtgtc
gctgactttcgcctcagtgaggcagccggtcgcgatgcgccgctggtgtttgcgcgcaag
agtggcaaaccgttaggcgatcctttgagcggcttttttaccgccaagggctatcgggaa
gcctttctggccaccagcctgacgcaagcaggcacgctgtcagaagagcaatgggtgctg
ggccgcgatcaggctgatcaacagaatgttgccagtctggccgcggacgtcaggcgtctg
tatttccaggactacctgagaaactgggacgccctgctcgccgacatcgacttcgtgccc
atcaccagcgtggcgcaggccgcggacgtgctgcgcgtcctctccgggccttcttcgccc
ttgaagaaactgctggtggcggtcgccaaagaaacagacctgcaacaggaagaaaaactg
ctcgctgctcaaggcaagaaagtcgatggcaatgtcgatcagctcaagcaaaagctcggc
tcgttgctgggtcaggaacaaccggccagcaacaccgcaacgccggtcagcagcgaagac
ccggtcagtgcgcactttgccgaactcaacagtctggtcagcaagggcgaaggcgaaccg
gctgccattgacggtctgttggcggacatgaacgcgctgtatgtacaggtcagcgccatg
gtcggtgccagcggtgatgcgctgcttggcgaggcgaaaaactcggccacggccgcagca
caacgcgtcagtctgacggcagagcgccaaccgcctctggtacaaggcttggtcaaatcc
gtggtcagctccaccaccaacacgatgatgggcggtgtgcgtaaccagttgaacgccgcc
tgggtgagcgaagtggtcaacgtttatcgccagtccctgagcgggcgttatcccctgtcg
cccggcagcaatcgcgatgccacgctggatgacttcggccagttcttcggggttggcgga
gtgatggacaactacttccgcagatacctgcaaccttacgtcgatacatcggcttccacc
tggcgctggcagcccggtgcagcacagaaactggggatcaatgcaggcgtgctgcagacc
ttccagcgtgctgcggcgatccgtgatgcgttcttccgttcaggtggaacccaaccgatg
gtgcgcttcgagctgaaaccggtggccatggatgcttcgatcacccagttcctgctcgac
cttgatggccagcagatcagttacgaccacggcccaagccgccctgtggcgatgcaatgg
ccgaatgccgggagcatcggcgtggtccgtatgtccatttcgccgccatcggccagtggt
cgctcggccattaccctggacggcccctgggcctggttccgtctgctggagcaatcggat
ctggtggcgggcagctcgccggaccgtttcaatctgcgcctgcgggtcgacagcgcgagc
atctcctacgagctgcgcgccaacagtgctttcaacccattcaagagtcgcgtcctcagc
ggcttcagcctgccggagcggttatga
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