Pseudomonas phytophila: K3169_03615
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Entry
K3169_03615 CDS
T09747
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ppao
Pseudomonas phytophila
Pathway
ppao03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ppao00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
K3169_03615 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppao03019
]
K3169_03615 (orn)
03009 Ribosome biogenesis [BR:
ppao03009
]
K3169_03615 (orn)
Messenger RNA biogenesis [BR:
ppao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
K3169_03615 (orn)
Ribosome biogenesis [BR:
ppao03009
]
Eukaryotic type
Pre-60S particles
RNases
K3169_03615 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
UXZ97011
UniProt:
A0ABY6FHF3
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All DBs
Position
859258..859794
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AA seq
178 aa
AA seq
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MQNKQNLIWIDLEMTGLDPDTDVIIEMATIITDSELNTLAEGPVIAVHQSDETLARMDEW
NTRQHGGSGLTQRVRESVISMAEAEAQTLEFIKQWVPERSSPICGNSICQDRRFLYRHMP
TLEHYFHYRNLDVSTLKELAARWSPDLKFQKGSTHLALDDIRESIAELRFYREHFIKG
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacaagcagaacctgatctggatcgatctggaaatgaccggcctggacccggac
accgacgtcattatcgaaatggcgacgatcatcactgacagcgaactcaacaccctggct
gaaggcccggtcatcgctgtgcaccagagtgatgaaaccctggccagaatggacgagtgg
aacacccgtcagcacggcggttcgggcctgacccagcgggttcgcgagagtgtcatcagc
atggctgaagcggaagcccagacgctggagttcatcaagcaatgggtgccggaacgcagt
tcaccgatctgtggcaacagtatttgccaggatcgtcgcttcctttatcggcacatgccg
accctggagcactactttcactaccgcaatctggatgtttctacgcttaaagagctggct
gcccgttggtcgcctgacttgaagttccagaagggcagcacccacctggcgctggacgac
atccgcgagtcaatcgccgagctgcggttctatcgcgagcatttcattaaaggctga
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