KEGG   Pseudomonas phytophila: K3169_03615
Entry
K3169_03615       CDS       T09747                                 
Symbol
orn
Name
(GenBank) oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
ppao  Pseudomonas phytophila
Pathway
ppao03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ppao00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    K3169_03615 (orn)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppao03019]
    K3169_03615 (orn)
   03009 Ribosome biogenesis [BR:ppao03009]
    K3169_03615 (orn)
Messenger RNA biogenesis [BR:ppao03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     K3169_03615 (orn)
Ribosome biogenesis [BR:ppao03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    K3169_03615 (orn)
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: UXZ97011
UniProt: A0ABY6FHF3
LinkDB
Position
859258..859794
AA seq 178 aa
MQNKQNLIWIDLEMTGLDPDTDVIIEMATIITDSELNTLAEGPVIAVHQSDETLARMDEW
NTRQHGGSGLTQRVRESVISMAEAEAQTLEFIKQWVPERSSPICGNSICQDRRFLYRHMP
TLEHYFHYRNLDVSTLKELAARWSPDLKFQKGSTHLALDDIRESIAELRFYREHFIKG
NT seq 537 nt   +upstreamnt  +downstreamnt
atgcagaacaagcagaacctgatctggatcgatctggaaatgaccggcctggacccggac
accgacgtcattatcgaaatggcgacgatcatcactgacagcgaactcaacaccctggct
gaaggcccggtcatcgctgtgcaccagagtgatgaaaccctggccagaatggacgagtgg
aacacccgtcagcacggcggttcgggcctgacccagcgggttcgcgagagtgtcatcagc
atggctgaagcggaagcccagacgctggagttcatcaagcaatgggtgccggaacgcagt
tcaccgatctgtggcaacagtatttgccaggatcgtcgcttcctttatcggcacatgccg
accctggagcactactttcactaccgcaatctggatgtttctacgcttaaagagctggct
gcccgttggtcgcctgacttgaagttccagaagggcagcacccacctggcgctggacgac
atccgcgagtcaatcgccgagctgcggttctatcgcgagcatttcattaaaggctga

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