Pseudomonas phytophila: K3169_04295
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Entry
K3169_04295 CDS
T09747
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
ppao
Pseudomonas phytophila
Brite
KEGG Orthology (KO) [BR:
ppao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppao03016
]
K3169_04295 (trmA)
Enzymes [BR:
ppao01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
K3169_04295 (trmA)
Transfer RNA biogenesis [BR:
ppao03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
K3169_04295 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_31
Methyltransf_4
Methyltransf_11
Methyltransf_12
Cons_hypoth95
MTS
RrnaAD
DREV
Methyltransf_15
TRM5-TYW2_MTfase
Ubie_methyltran
PrmA
Motif
Other DBs
NCBI-ProteinID:
UXZ97139
LinkDB
All DBs
Position
complement(1016266..1017357)
Genome browser
AA seq
363 aa
AA seq
DB search
MSASIPFDPASYDTQLQAKADRLRELLAPFDAPEPQVFDSPKENYRLRAEFRLWREDQKR
HYAMFTPGDNKNPILLDGLPIASLRINALMPVLRDRWEASKVLNHKLFQVDFLTTLAGDA
MITLCYHRPLDDEWLAEAEKLAADLDVSLIGRSKGQRLVIGRDYVTEELEVAGRTFSYRQ
PEGAFTQPNGTVNQKMLDWAYAALGDREDDLLELYCGNGNFTLPLATRVRKVLATEISKT
SVNAALSNLADNAVDNVTLVRLSAEELTEALNEVRPFRRLHGVDLKSYDFGSVFVDPPRA
GMDPDTCELTRRFERILYISCNPETLAANIAQLHDTHRVERCALFDQFPYTHHMESGVLL
VRR
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgagtatccccttcgatcctgcgagctatgacactcagctccaggccaaagca
gatcgcctgcgtgaactgctggccccttttgatgcgcccgagccgcaggtgtttgactcg
cccaaagaaaactaccggctgcgcgccgagttccgcctgtggcgcgaagaccagaagcgt
cactacgcgatgttcacccccggcgataacaagaacccgatcctgctggacggtctgcct
atcgccagcctgcgcatcaacgccctgatgcccgtactgcgcgaccgctgggaagccagc
aaggtgcttaaccacaagctgttccaggtggacttcctgaccacgctggcgggcgatgcg
atgatcaccctgtgttatcaccgcccgctggacgatgagtggctggccgaggctgaaaag
ctggccgccgatctggacgtgagcctgatcggccgctccaaaggccagcgtctggtgatt
ggtcgtgattacgtgacagaagagctggaagtcgccggtcgcaccttcagttaccgtcaa
cccgaaggtgcgttcacccaacccaacggtaccgtgaaccagaagatgctcgactgggcg
tacgccgcattgggcgaccgtgaagatgacttgctggagttgtattgcggcaacggcaac
ttcaccctgccgttggcgacccgtgtgcgcaaagtgctggcgaccgaaataagcaagaca
tcggttaacgccgccttgagcaatctggccgataacgcggtggataacgtgacgctggtg
cgactgtcggcagaggaattaactgaagcgctgaatgaagtgcgtccgttccgccgtttg
cacggcgtggacttgaagagctacgacttcggcagcgtcttcgtcgacccgccccgcgcc
ggtatggacccggacacctgcgagctgacccgccgcttcgaacgcatcctgtacatttcg
tgcaacccggaaaccctggccgccaacatcgcgcaactccacgatacgcaccgtgtggag
cgttgcgcgctgtttgaccagtttccgtatacccaccatatggagtcaggggtgttgctg
gttcgccgctaa
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