Pseudomonas phytophila: K3169_05395 Help Entry K3169_05395       CDS       T09747                                  Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism ppao  Pseudomonas phytophila Pathway ppao02020   Two-component system ppao02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:ppao00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     K3169_05395  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     K3169_05395  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:ppao03021]     K3169_05395 Transcription machinery [BR:ppao03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      K3169_05395 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID CCDC14 HTH_IclR DUF3164 Motif Other DBs NCBI-ProteinID:  UXZ97334 UniProt:  A0ABY6FHL2 LinkDB All DBs Position complement(1251562..1253055) Genome browser AA seq 497 aa AA seqDB search MKPSLVLRMGQQLTMTPQLQQAIRLLQLSTLDLQQEIQEALESNPMLERQEEGDDFDNAD PLADNVEQKPNPDVQEPTYQEPAPTVDNLEEGDWSERIPNELPVDTAWEDVYQTSASSLP SNDDDEWDFTTRTSAGESLQSHLLWQLNLAPMSDTDRLIAVTLIDCINNQGYLDETLEEI LDAFDPELDIELDEIEAVLHRIQQFEPAGIGARNLSECLLLQLRQLPAKTRWLSEAQRLV SDYIDLLGSRDYSQLMRRMKLKEDELRQVIELVQSLNPRPGSQIESTEAEYVVPDVIVRK DNERWLVELNQESVPRLRVNPQYAGFVRRADTSADNTFMRNQLQEARWFIKSLQSRNETL MKVATQIVEHQRGFLEYGDEAMKPLVLHDIAEAVGMHESTISRVTTQKFMHTPRGIYELK YFFSSHVSTSEGGECSSTAIRAIIKKLVAAENQKKPLSDSKIAGLLEAQGIQVARRTVAK YRESLGIAPSSERKRLM NT seq 1494 nt NT seq  +upstreamnt  +downstreamnt atgaaaccatcgctagtcttgagaatgggccagcagctgacgatgacgccgcagctgcaa caggccatccgcttactccaattgtcgacactggacctccaacaggagatccaggaggca ctggagtcgaaccctatgctggaacgccaggaagaaggcgacgatttcgacaacgctgat ccactggctgacaacgtcgagcagaaacctaatcctgatgtccaggagccgacttatcag gagccggcgcctactgtggacaaccttgaggagggcgactggagcgagcgcatccccaac gagctgcccgtcgacaccgcgtgggaagacgtctaccaaaccagcgccagcagcctgccc agcaacgacgatgacgaatgggacttcaccactcgcacttctgccggtgagagcctgcaa agccatttgctctggcagttgaatctggcgccgatgtccgacaccgatcgcctgatcgcc gtgacgctgatcgactgcatcaacaatcagggttatctggacgagacgctggaagaaatc ctcgacgccttcgatcccgagcttgatatcgagctcgacgagattgaagccgtgctccac cgcatccagcagtttgaacccgccggcatcggcgcgcgcaaccttagcgaatgcctgctg ctgcaactgcgtcagctacctgcaaaaacccgttggctcagcgaagcacagcgcctggtc agtgactacatcgacctgctggggagccgcgactactcgcagctcatgcgccgcatgaag ctcaaggaagatgaactgcgccaggtcatcgaactggtgcaaagcctcaaccctcgcccg ggttcgcaaatcgagtccaccgaagctgagtatgtggtaccggacgtcattgtgcgcaag gacaacgagcggtggctggttgagctcaatcaggaatcggtcccacgcctgcgtgtgaat ccgcaatacgccgggtttgtccgccgcgctgataccagcgccgataacaccttcatgcgc aatcagctgcaagaagcacgctggttcatcaaaagcctgcagagccgcaatgaaaccctg atgaaagtggcgacacagatcgtcgagcaccagcgcggctttcttgagtatggcgatgag gcgatgaagccactggtcctgcatgacattgcagaggccgtaggcatgcatgagtcgacc atttctcgtgtaaccacgcagaaattcatgcataccccccgtggtatttacgagttgaaa tatttcttctcgagccatgtaagcacctccgagggcggtgaatgttcatccacagccatt cgggcgatcatcaaaaaactggttgcagcggaaaatcagaaaaagccgttgagtgacagc aagatcgctggtttactggaggcacaaggcattcaagtagcccgtcgcacagtagccaaa taccgcgaatctcttggcattgcgccgtcgagtgaacgcaagcgactgatgtga

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