Pseudomonas phytophila: K3169_06625
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Entry
K3169_06625 CDS
T09747
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ppao
Pseudomonas phytophila
Pathway
ppao03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ppao00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
K3169_06625 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppao03019
]
K3169_06625 (rnc)
03009 Ribosome biogenesis [BR:
ppao03009
]
K3169_06625 (rnc)
03036 Chromosome and associated proteins [BR:
ppao03036
]
K3169_06625 (rnc)
Enzymes [BR:
ppao01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
K3169_06625 (rnc)
Messenger RNA biogenesis [BR:
ppao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
K3169_06625 (rnc)
Ribosome biogenesis [BR:
ppao03009
]
Eukaryotic type
90S particles
RNase
K3169_06625 (rnc)
Prokaryotic type
rRNA processing factors
K3169_06625 (rnc)
Chromosome and associated proteins [BR:
ppao03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
K3169_06625 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
MmeI_N
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
UXZ97560
UniProt:
A0ABY6FI03
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All DBs
Position
1509330..1510019
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AA seq
229 aa
AA seq
DB search
MSVSLSRLERQLGYTFKDQELMVLALTHRSFAGRNNERLEFLGDAILNFVAGEALFDRFP
QAREGQLSRLRARLVKGETLALLARGFDLGEYLRLGSGELKSGGFRRESILADALEALIG
AIYLDAGMEMARERVLAWLTTEFDSLTLVDTNKDPKTRLQEFLQSRACELPRYEVVDIQG
EPHCRTFFVECEITLLNEKSRGQGVSRRIAEQVAAAAALIALGVENGHD
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgtttccttgagtcgcctggagcgtcagctcggctataccttcaaggatcaggaa
ctgatggtcctggccctgactcaccgtagcttcgccggtcgcaataatgagcgtctggag
ttcctcggtgatgccattctgaacttcgttgcgggtgaagcgctgtttgaccgcttcccg
caggcacgtgaaggccagttgtcgcgtctgcgagcgcgtctggtgaaaggcgaaaccctg
gccttgctggcccgcggttttgatctgggtgagtacctgcgcctcgggtctggcgaattg
aagagcggcggcttccgtcgtgagtcgattctggccgacgcccttgaggcgctgattggt
gcgatttatctggatgcaggcatggagatggctcgcgaacgcgtgctggcctggctgacc
acggagttcgacagcctgacgctggtcgacaccaacaaagatccaaaaacccgattgcaa
gagtttctgcagtcgcgtgcctgtgagctgccgcgttacgaagtggtggatatccagggc
gaaccgcattgccggacattttttgtcgaatgcgagatcaccttattgaatgaaaaaagc
cggggtcagggtgtcagccgtcgtattgccgaacaggtagcagcggccgcagcactcatt
gcccttggcgtggagaacggccatgactga
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