Pseudomonas phytophila: K3169_07680
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Entry
K3169_07680 CDS
T09747
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
ppao
Pseudomonas phytophila
Brite
KEGG Orthology (KO) [BR:
ppao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppao03036
]
K3169_07680 (xerD)
Chromosome and associated proteins [BR:
ppao03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
K3169_07680 (xerD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
DUF3435
Motif
Other DBs
NCBI-ProteinID:
UXZ97753
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All DBs
Position
1733993..1734889
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AA seq
298 aa
AA seq
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MSAIDDPLIDRFLDALWLEKGLSDNTRDAYRSDLALFNGWLQEQGLELINVGRSAILDHL
AWRVDKAYKPRSTARFLSGARGFYRYLLREKLIQVDPTLQVDMPQLGRPLPKSLSEADVD
ALLAAPDLSEAIGQRDKAMLEVLYACGLRVTELISLTLEQVNLRQGVLRVMGKGSKERLV
PMGEEAIVWIERYMRGARDELLAGRPSDVLFPSQRGEQMTRQTFWHRIKHQAMVAGISKS
LSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVARARLQDMHAKHHPRG
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctatcgatgaccctctgatcgaccggtttcttgatgccctttggctggagaag
gggctctcggacaatacgcgtgatgcctatcgcagtgaccttgccctgttcaacggctgg
ttgcaggagcaaggcctggaattgatcaatgttggacgctcggcgattcttgatcatctg
gcctggcgggtggacaaggcctacaagcctcgctccacggcacggtttctttcaggtgcc
cgtggcttctaccgttacctgctgagagagaaactgattcaggtcgatcccacgctgcag
gtggacatgcctcagcttggcaggccattgcccaagtcactgtcggaagcagacgttgac
gcgttactggctgcacctgacctgagtgaagctatcggccagcgggataaagccatgctc
gaagtgctttatgcctgtggcttgcgagtcaccgagctgatcagtctgaccctggagcag
gtcaatctccgtcagggtgtattgagggtgatgggcaagggcagcaaggagcgtctggtc
cccatgggcgaagaggccattgtctggatcgaacgctacatgcgcggggctcgcgatgaa
ttgctggcggggcgtcccagtgatgtgttgtttcccagtcagcggggagagcagatgacc
cgccagaccttttggcaccggatcaaacatcaggccatggttgcaggtatcagcaagtcg
ctgtcgcctcatacattgcggcatgctttcgcaacccacttgctcaaccatggcgctgac
ttgcgcgtggtgcagatgttgttggggcacagtgatctgtcaacgacacaaatctatacc
catgttgcccgtgcccgattgcaggacatgcacgccaaacatcacccgcgcggctga
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