Pseudomonas phytophila: K3169_10970
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Entry
K3169_10970 CDS
T09747
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
ppao
Pseudomonas phytophila
Brite
KEGG Orthology (KO) [BR:
ppao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppao03000
]
K3169_10970
Transcription factors [BR:
ppao03000
]
Prokaryotic type
Helix-turn-helix
Other families
K3169_10970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
HTH_30
HTH_7
AAA_5
HTH_23
AAA_2
nSTAND6
HTH_11
PAS_8
HTH_20
HTH_29
AAA
HTH_3
nSTAND3
HTH_10
HTH_22
Mg_chelatase
HTH_24
HTH_17
dnstrm_HI1420
HTH_28
HTH_26
Phage_CP76
AAA_3
HTH_38
Xre-like-HTH
AAA_7
DUF2089
HTH_36
TetR_N
HTH_psq
HTH_AsnC-type
MerR
HTH_Tnp_1
DUF815
Sec8_N
TrmB
Motif
Other DBs
NCBI-ProteinID:
UXZ98341
UniProt:
A0ABY6FKR9
LinkDB
All DBs
Position
complement(2465698..2467542)
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AA seq
614 aa
AA seq
DB search
MAIHRASVAHDAIIRDSWSRCRDFGLSHQSRPSFGQLPTDQVSQLLERHQALVHTTHQEV
LPFYENILSNSNCLIMLADNRGQLLKSWGTQRFVEPSHAHGFMAGASWIESATGTNAIGT
ALVCEQAVHIEHNEHFLKANRFMTGSAAPIYDAARRLVAVLDVSSDSFLPPSHTLGMVKM
MSQSVENRLILDQFQDSHFQLTFNTGLNNLDSQWAGLLIFDESGRIISANRRADNLLGVS
LMRTSIEALFNNPTAFLLNQPEGLPFSLLASGNNRFHGVLRRPKRNPLNIHAFQPAPKPA
PHDGVPLSSVSLGDARVDKAVRQAERLLEKNIALLIHGETGVGKEVFVKALHNASSRSTK
PLIAVNCAAIPAELVESELFGYEKGAFTGAHHKGNIGLIRKADKGTLFLDEIGDMPLPVQ
ARLLRVLQERCVQPLGSSELHPVDVRLISATNRNLRDEVLAGRFRQDLYYRISGLNLELP
PLRERTDKAALVQRLWEQHREVQQTRGFEPKVLELFDRHPWPGNLRQLSNVIQVALALAD
DEVIGTEHLPDDFFADLEMDLQGMQPVLSDKAQLREAENLEELLRAAGGNISQLAKRLGV
SRNTLYKRLREQQG
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggccatacaccgtgcatccgttgctcatgacgccatcatccgagactcatggtcccgc
tgtagggactttggtctgagtcatcagtccagaccctctttcggccagttgccgacggat
caggtatcgcagttactggagcgccatcaggcgctggtgcacaccacccaccaggaagtc
ctgccgttttacgaaaacatcctcagtaattccaactgcctgatcatgctggccgataat
cgtggtcagttgctcaagtcgtggggcacccagcgttttgtcgaaccctcccacgcgcat
ggtttcatggcaggcgccagctggatcgaaagcgccacggggaccaatgccattggcact
gcgctcgtctgcgaacaggccgtacatatcgagcacaacgaacactttctcaaagccaac
cgtttcatgaccggctcggcggcaccgatttacgatgcggcgcgacgattggttgcggta
ctggatgtttccagcgatagcttcctgccgccttcccacacgctgggcatggtgaaaatg
atgagtcagtcggtggagaaccgactgatcctcgaccagtttcaggacagccactttcag
ctgaccttcaacaccggactgaacaacctcgacagccagtgggcaggcttgctgatattt
gatgaaagcgggcggatcatcagcgcgaaccgtcgcgccgacaatttgttgggggtcagc
ctgatgcggaccagtatcgaggcgctgttcaataacccgacggcttttctgctcaatcaa
cctgaaggcctgcccttctcgctactggcctccggcaacaatcgctttcatggtgtattg
agacggcccaaacgtaatccgctaaacattcacgcttttcagcccgcaccgaaaccggcg
ccgcacgacggggtccctctgtcgtcggtcagccttggagatgcgagggtcgacaaagcc
gtgcgccaggccgagcggctgcttgagaagaacatcgccctgctgattcatggcgaaacc
ggtgtgggtaaagaggtgttcgtcaaagcgctgcacaacgccagctcccgatccaccaag
ccattgatcgcggtgaactgtgcagccattccggccgaactggtggagtcggagctgttt
ggctatgaaaaaggcgcattcaccggcgcgcaccataaaggcaacatcggtctgattcgc
aaagcggacaagggcacgctgttcctcgacgaaatcggcgacatgccgctgccggttcag
gctcgtctgttacgggttttgcaggaacgttgcgtgcagccgttaggcagcagcgaattg
catccggtggatgtgcgactgatctccgcgacgaaccgcaacttgcgcgacgaagtattg
gccgggcgctttcgtcaggatttgtattaccggatcagcgggctgaatctggagctgccg
ccgctgcgtgagcgtaccgacaaggccgctctggttcagcgactctgggagcagcatcgc
gaagtgcagcagactcgaggcttcgagccgaaagtgctggagttgtttgatcgccacccg
tggccgggcaacttgcgccagctcagcaatgtgattcaggtggcgttggcgctggcggac
gatgaggtcataggtacggagcatcttccggatgatttcttcgcggatcttgagatggac
ttacagggcatgcagccggtcctcagcgataaagcacagctgcgcgaggcggagaatctg
gaagagctgttgcgggcggcgggcggtaatatttcccaactggccaagcgcctgggggta
agcaggaatacgctttataagcggttacgggaacagcagggttga
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