Pseudomonas phytophila: K3169_11725
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Entry
K3169_11725 CDS
T09747
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
ppao
Pseudomonas phytophila
Pathway
ppao00071
Fatty acid degradation
ppao00280
Valine, leucine and isoleucine degradation
ppao00310
Lysine degradation
ppao00362
Benzoate degradation
ppao00380
Tryptophan metabolism
ppao00410
beta-Alanine metabolism
ppao00640
Propanoate metabolism
ppao00650
Butanoate metabolism
ppao00907
Pinene, camphor and geraniol degradation
ppao00930
Caprolactam degradation
ppao01100
Metabolic pathways
ppao01110
Biosynthesis of secondary metabolites
ppao01120
Microbial metabolism in diverse environments
ppao01200
Carbon metabolism
ppao01212
Fatty acid metabolism
Module
ppao_M00087
beta-Oxidation
ppao_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ppao00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
K3169_11725 (fadB)
00650 Butanoate metabolism
K3169_11725 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
K3169_11725 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
K3169_11725 (fadB)
00310 Lysine degradation
K3169_11725 (fadB)
00380 Tryptophan metabolism
K3169_11725 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
K3169_11725 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
K3169_11725 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
K3169_11725 (fadB)
00930 Caprolactam degradation
K3169_11725 (fadB)
Enzymes [BR:
ppao01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
K3169_11725 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
K3169_11725 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
K3169_11725 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
K3169_11725 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
UXZ98480
UniProt:
A0ABY6FKQ3
LinkDB
All DBs
Position
2635030..2637177
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELNFDLKGESVNKFNRLTLNDLRQAVDTIKADGSIKGVIVTS
GKDVFIVGADITEFVDNFKLPDAELLAGNLEANRIFSDFEDLGVPTVVAINGIALGGGLE
MCLAADYRVMSSSAKIGLPEVKLGLYPGFGGTVRLPRIVGADNAIEWIASGKENRAEDAL
KVGAVDAVVAPEKLQEAALDLIKRAIFGEFDYKAKRQPKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMAKTSAAQSLIGLFLNDQEL
KRKAKVYDEAARDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDIREDAIQLGLNEASKL
LGNRVEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEAVVENPKVKQAVLAEVEAQVG
EDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSELAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLISAGVDFVRIDKIMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYEAKRLGQKNGKGFYAYETDKKGKP
KKVTDSAVLEVLKPIIYEQREVSDEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLIY
GIGFPPFRGGALRYIDSIGVAEFVALADQYADLGALYHPTAKLREMAKNGQSFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgagagcggcatcgtcgaattg
aatttcgacctcaagggtgagtccgtcaacaagttcaaccgtctcaccctcaacgacctt
cgtcaggccgtggataccatcaaggctgatggctccatcaagggcgtgattgtcaccagc
ggcaaggacgtcttcatcgtcggtgccgacatcactgagttcgtcgacaacttcaagctg
ccggatgcagagctgctggcgggcaatctggaagccaaccggattttcagcgatttcgaa
gaccttggcgtacctaccgtggtggccattaacggtatcgcgctgggtggcggtctggaa
atgtgcctcgccgcagactaccgggtaatgtccagcagcgccaaaatcggcctgcctgaa
gtcaaactgggtctctaccctggttttggcggtaccgtgcgtctgccacgtatcgtaggt
gccgacaacgctatcgagtggattgcttccggcaaggaaaatcgcgccgaagacgccctg
aaagtcggtgcagtcgatgctgtggtcgctcctgaaaaacttcaggaagctgcgctggac
ctgatcaagcgcgctattttcggtgagttcgattacaaggccaagcgccagccaaaactg
gaaaaactcaagctcaacgccatcgagcaaatgatggcgttcgaaaccgccaagggtttc
gtcgccggtcaggctggcccgaactatccagccccggtcgaagcgatcaagacgatccag
aaagctgcgaacttcggtcgtgacaaggcgctggaaatcgaagctgccggttttgtgaaa
atggccaagacctctgcggcacagagtctgatcggcctgttcctgaatgatcaggaactg
aagcgcaaagccaaggtttacgatgaagccgccagagacgtgaaacaggctgccgtgctg
ggcgcaggcatcatgggtggtggtattgcctaccagtcggcctcaaaaggtacgccgatc
ctgatgaaggacattcgtgaagacgccatccagttgggtctgaacgaagcctcgaaactc
ttgggaaaccgtgttgaaaaaggccgtctgactgctgccaaaatggccgaagcgctcaat
gcgattcggccgacgctgtcctacggcgatttcggcaacgtcgacctggtggtcgaagcc
gttgtcgagaatccgaaggtcaagcaggcggtattggctgaagtcgaagctcaggtaggc
gaagacactattctggcttccaatacctcaacgatttccatcagcttgctggcaaaagcc
ctcaaacgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgcca
ctggttgaagtcattcgtggcgagaagtccagtgagctggcagttgccaccaccgtggcc
tacgccaagaaaatgggcaagaacccgatcgtggtcaacgactgccctggcttcctggtc
aaccgcgtgctgttcccgtacttcggcggtttcgcccgactgatcagtgccggtgtggac
tttgtgcgcatcgacaaaatcatggagaaattcggctggcctatgggcccggcgtacctg
atggacgtggtcggcatcgacaccggccaccacggtcgcgacgtcatggccgaaggcttc
ccggatcgcatgaaggacgaccgtcgctctgctattgacgcgctttatgaagcgaagcgc
ctgggccagaagaacggcaaaggtttctacgcttatgagaccgacaagaagggcaagccg
aagaaagtcaccgactctgctgtgctcgaagtcctcaagccgatcatctacgaacagcgt
gaagtgtccgacgaagacatcatcaattggatgatgatcccgttgtgtctggaaaccgta
cgctgcctggaagacggtatcgtcgaaacggccgctgaagctgatatgggcttgatctac
ggcatcggtttccctccgttccgtggcggtgcgttgcgctacatcgactctattggtgtc
gctgaattcgttgccctggccgatcaatatgctgatttgggcgctttgtaccacccgacc
gcgaagctgcgtgagatggccaaaaacggccagagcttcttcggttga
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