Pseudomonas phytophila: K3169_14460
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Entry
K3169_14460 CDS
T09747
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ppao
Pseudomonas phytophila
Brite
KEGG Orthology (KO) [BR:
ppao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppao03032
]
K3169_14460
03400 DNA repair and recombination proteins [BR:
ppao03400
]
K3169_14460
Enzymes [BR:
ppao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
K3169_14460
DNA replication proteins [BR:
ppao03032
]
Prokaryotic type
DNA Topoisomerases
K3169_14460
DNA repair and recombination proteins [BR:
ppao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K3169_14460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
UXZ98981
LinkDB
All DBs
Position
complement(3205576..3206628)
Genome browser
AA seq
350 aa
AA seq
DB search
MPDSTVIDQLPPDLHYVEDTQAGFSRKILRGKFVYFDKDGQRIRDEAEIKRINALVIPPA
YTDVWICPDPRGHLQATGRDARGRKQYRYHARWREVRDENKYSRMIEFGLALPKVRKKIE
AQLAEPGIGRDKVMATVVSLLDATLIRIGNSQYARDNRSYGLTTLRNKHVEVHGNDILFQ
FRGKSGVEHQINVTDRRLAKVIKRCMELPGQNLFQYLDDNGERHTVSSSDINAYLQKLTG
SDFTAKDYRTWAGSALALATLRKLHWEPEADAKKHIVDMVKQVARQLGNTPAVCRKCYIH
PAVLEGFLLGELALIPKSRQRKGLRHEEVALAIYLQSLAEKVLAESSGSA
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgcctgactcgaccgttatcgaccaactgccgccggacctgcattacgttgaggatacc
caggcgggtttcagccgaaagatcctgcggggcaagttcgtttacttcgacaaagacggc
caacggattcgtgacgaagcggaaatcaaacgaatcaacgcactggtcatccccccggct
tataccgatgtatggatttgtcccgatccgcgcgggcacttgcaggccacgggtcgcgac
gcgcgcggacgcaagcaataccgctatcacgcacggtggcgtgaagttcgcgatgagaac
aaatactcacgcatgatcgaattcggtctggccttgcccaaggtccgcaagaagatcgaa
gcgcagctcgccgaacccgggattggccgggacaaggtcatggccacggttgtctcgttg
cttgatgccacgctgatccgtatcggtaacagccagtacgcgcgggataaccgttcctac
ggcttgaccacgctgcgcaacaagcacgtcgaagtacatggcaacgacatcctgttccag
tttcgcggcaaaagcggcgtcgaacaccagatcaatgtgactgaccgacgcctggccaag
gtcatcaaacgctgcatggaattgcccggccagaacctgttccagtacctggatgacaac
ggcgagcgccataccgtgagttcttcagatatcaacgcgtacctgcaaaagctcacgggc
tcggatttcacagcgaaggactaccgaacctgggcaggcagcgcgctggcactcgccacc
ctacgcaaactgcactgggaaccggaggccgacgcaaaaaaacacattgtcgatatggtg
aagcaggtcgccaggcaactgggcaataccccggctgtctgccgcaagtgctacatccat
cctgctgtgctggaaggctttttgctgggagagcttgcgctgataccgaagtcccgacaa
cgtaaaggcttgcgccatgaagaggtagcgctggccatttatctccagagcctcgcggaa
aaagtgctggcggaatcctcaggcagcgcctga
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