Pseudomonas phytophila: K3169_15765
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Entry
K3169_15765 CDS
T09747
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
ppao
Pseudomonas phytophila
Pathway
ppao03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppao00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
K3169_15765
09124 Replication and repair
03420 Nucleotide excision repair
K3169_15765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppao03021
]
K3169_15765
03036 Chromosome and associated proteins [BR:
ppao03036
]
K3169_15765
03400 DNA repair and recombination proteins [BR:
ppao03400
]
K3169_15765
Enzymes [BR:
ppao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
K3169_15765
Transcription machinery [BR:
ppao03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
K3169_15765
Chromosome and associated proteins [BR:
ppao03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
K3169_15765
DNA repair and recombination proteins [BR:
ppao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
K3169_15765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
ResIII
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
UXZ99224
LinkDB
All DBs
Position
complement(3495997..3498297)
Genome browser
AA seq
766 aa
AA seq
DB search
MSTQELRSLAPDPADQARYLVAVRALCEFTAKAGDLDLRFTPSPTAQEGIAGHRSVAARR
GPGYQSEVSLSGEYQQLRIRGRADGYDPALNQLEEIKTYRGELSTMPDNHRQLHWAQVKV
YGWLLCQQLQLDEVNLALVYFNIVTEQETLIRERFTASILQAFFEQHCAIFLRWAEQELE
HSSGRNQQLNQLKFPHGSFRTGQRHLAESVFKAVSTGRCLMAQAPTGIGKTIGTLFPMLK
AAPTQKLDKVFFLTAKTPGRKLALDALTVIRTSAPELKLRVLELVARDKACEHPDKACNG
DSCPLAKGFYDRLPAARSAALYAPWLDQAGMRDVALAHEVCPYYLGQEIARWADVVIADY
NYYFDLSGLLFGLSQFNQWRVAVLVDEAHNMVERARQMYSASLDQQNLSTLRQTAPEALQ
KTLQRLNREWNALHKEQVAPYQAYAETPGKFLQSLNLCVASMGDYFNDHPHALNGALQSF
YFEAIAFVRIAELFDEHFVFDISKRAQSSKRSYSRLCLRNVVPARFIRPRLTAARSSVLF
SATLSPRHYYADLLGLPPDTAWIDVESPFSREQLDVQIISRISTRFTHRQASLAPIVELL
SEQFQARPGNYLAFFSSFDYQQQVADLMQQSHPHIPIWQQARGMSESDRQGFLDRFTLES
QGIGFAVLGGAFGEGIDLPGARLIGAFIATLGLAQLNPVNEQIKQRMAVLFGAGYDYTYL
FPGVQKVVQAAGRVIRGQQDQGVVMLIDDRFAEPKVRQLLPRWWQL
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atcagcactcaagagctgcgctcgctggcgcctgatcccgctgatcaggctcgttatctt
gtcgcggtgcgtgcgctgtgcgagttcaccgccaaagcaggcgaccttgatctgcgcttc
acgccatctcctaccgcacaggaaggcatcgcggggcatcgcagtgttgcggcgcgacgc
ggtcccggttatcagtcagaggtttcactgtcgggtgaatatcagcaactgaggattcgt
ggtcgggccgatggttatgacccggcactaaaccagttggaggagatcaagacttaccgc
ggcgaattgtcaacgatgccggacaatcaccggcagttgcactgggcgcaggtgaaggtc
tacggctggctcctctgccagcaattgcagctggacgaagtcaacctggcgctggtgtat
ttcaacattgtcaccgagcaggaaacgctgattcgtgagcgcttcactgcgtcgatcctg
caggcgttctttgaacaacattgcgccatatttttgcgctgggcagagcaggagctggag
cactccagtgggcgtaatcaacagttaaaccagctgaaatttcctcacgggagtttccgt
accggtcagcgtcatctggcggaatcggttttcaaggcggtcagcaccggccgttgcctg
atggcgcaggcgcctactggtattggtaaaaccattggcactttgtttccgatgctcaag
gctgcgccgacgcagaagctggacaaagtgttcttcctgaccgccaaaacgcctggccgc
aaactggcgctggatgcgttgacagtgatccgtacgagtgcgccggagttgaaattgcgc
gtgctggagctggtcgcccgggacaaggcttgcgagcatccggataaagcctgcaatggc
gattcctgcccgctggccaagggtttttatgaccgtctgccggcggcgcgcagtgctgcg
ttgtacgctccctggctggaccaggccggtatgcgtgatgtggcacttgctcatgaggtc
tgcccgtactacctcggtcaggagatcgcgcgttgggcggacgtggtgattgctgactac
aactactatttcgatctcagcggcttgttgttcgggctcagccagttcaatcagtggcgc
gtggcggtgttggtggacgaagcccacaacatggtcgagcgagccaggcagatgtacagc
gccagcctcgatcagcagaacctgagcacgttgcgccagacggcacccgaagcgttgcag
aaaaccctgcaacgcttgaatcgtgaatggaatgcgctgcacaaggagcaggttgctccg
tatcaggcctatgccgaaaccccgggcaaatttctgcaaagcctgaacctgtgcgtcgca
tccatgggggattatttcaatgatcaccctcatgcgctgaatggcgcgctgcaaagcttt
tattttgaggcgattgcgtttgtgcgcatcgccgagttgttcgacgagcattttgtgttc
gatatcagtaaaagggcgcagagcagcaagcgtagctattccaggctgtgcctgcgcaat
gtggtgcctgcccgtttcattcgacccaggctcacagccgcccgtagcagtgtgttgttc
tcggcaaccctgagcccgcgtcactactatgccgatctgttgggcttgccgccggatacc
gcgtggattgatgtggagtcgccgttcagtcgcgaacagctggacgtgcagatcatcagt
cgtatttccacacgattcacccatcgtcaggcgtcactggcgcccatcgtggagcttttg
tctgaacagtttcaggctagaccgggcaactatctggcgttcttcagcagttttgattat
cagcagcaagtcgcggatttgatgcagcaaagccatccacacatcccgatctggcagcag
gcgcggggcatgagtgaaagtgatcgtcagggctttcttgatcgtttcaccctggaaagt
cagggcatcggctttgccgtactgggtggtgcatttggcgaaggcatcgacttgccgggc
gcgcgattgatcggtgcattcattgcgacactggggctggctcaactcaaccccgtcaat
gagcagatcaaacaacgcatggctgtgttgttcggcgcgggctacgattacacctacctc
ttcccaggggtgcaaaaggtcgtgcaagcggcggggcgagtgattcgagggcagcaggat
caaggcgtggtcatgctgatcgatgatcgatttgccgagccgaaggtgcgtcagttactc
ccgcgctggtggcagctatga
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