Pseudomonas phytophila: K3169_18930
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Entry
K3169_18930 CDS
T09747
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
ppao
Pseudomonas phytophila
Pathway
ppao03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K3169_18930 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppao03400
]
K3169_18930 (uvrB)
DNA repair and recombination proteins [BR:
ppao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K3169_18930 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K3169_18930 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_22
AAA_30
HAMP
Cauli_AT
Motif
Other DBs
NCBI-ProteinID:
UXZ94435
UniProt:
A0ABY6F991
LinkDB
All DBs
Position
complement(4226519..4228534)
Genome browser
AA seq
671 aa
AA seq
DB search
MSEFQLVTRFEPAGDQPEAIRQLVEGIDAGLAHQTLLGVTGSGKTFSIANVISQVQRPTL
VLAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQ
MRLSATKALLERKDAIIVTTVSCIYGLGSPETYLRMVLHVDRGDKLDQRALLRRLADLQY
TRNDMDFARATFRVRGDVIDIYPAESDLEAIRIELFDDEVESISSFDPLTGEVIRKLPRF
TFYPKSHYVTPRETLVEAMEGIKVELQERLEYLRTNNKLVEAQRLEQRTRFDLEMILELG
YCNGIENYSRYLSGRPSGAPPPTLYDYLPADALLVIDESHVSVPQVGAMYKGDRSRKETL
VEYGFRLPSALDNRPMRFDEWEAVSPQTIFVSATPGNYEAEHAGRIVEQVVRPTGLVDPQ
IEIRPALTQVDDLLSEITKRVALEERVLVTTLTKRMSEDLTDYLADHGVRVRYLHSDIDT
VERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLNGRAILYADRITGSMERAIGETERRRDKQIAFNLANGITPKGVFKDVADIMEGATV
PGSRSKKRKGMAKAAEESAKYENELRSPSEITKRIRQLEEKMYQLARDLEFEAAAQMRDE
IGKLRERLLTV
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagtttcagctcgtaacccgttttgagcctgctggtgatcagccagaggctatt
cgccaactggtcgaagggatcgatgccggcctggcgcaccagaccctgctgggggtgacc
ggctcaggcaagacattcagcatcgccaatgtcatctcgcaggtgcagcgccccacgttg
gtgctcgcgccgaacaagaccctggccgcgcagttgtacggtgagttcaaggcatttttc
ccgaacaacgccgttgagtatttcgtctcttattacgattactaccagcctgaggcctat
gtgccgtcgtcggacaccttcatcgagaaggatgcgtcgatcaacgaccacattgaacag
atgcgtctgtccgcgaccaaggcgctgctggagcgcaaggacgccatcatcgtcaccacg
gtgtcgtgcatttatggtctgggcagcccggaaacctatctgcgcatggtcttgcacgtg
gatcggggcgacaaactcgatcagcgcgccttgttgcgtcgtctggctgacctgcaatac
acccgcaatgacatggatttcgcccgggccacgttccgggtgcgcggtgatgtgattgat
atctacccggccgagtcggatctggaggcgattcgcatcgagctgttcgacgacgaggta
gaaagcatttcctcgttcgatccgctgaccggcgaggtgatccgcaagctgccacgcttt
accttctaccccaagagccactacgtcacacctcgggaaaccctggtcgaagcgatggag
ggcatcaaggttgagttgcaggagcgtcttgagtacctgcgcaccaacaacaagctggtt
gaagcccagcgtcttgagcagcggacccgtttcgacctggaaatgatcctggagctgggt
tactgcaacggcattgaaaactactcgcgctacctgtcaggacgtccttcgggcgcgccg
ccgccgacgttatacgactacctgccagcggatgcgctgctggttatcgacgaatcccac
gtcagcgtgccgcaggtcggtgccatgtacaaaggcgaccgctcccgtaaggaaaccctg
gtggagtatggcttccgtctgccgtcggcactggataaccggccgatgcggtttgacgag
tgggaagcggtcagtccgcaaacgatctttgtttcggcgacaccgggcaactacgaggct
gaacacgcgggtcgtatcgtcgagcaggttgtgcggccaaccggtctggtagacccgcaa
atcgagattcgtccggcgctgactcaggtggatgatttgctttcggaaatcaccaagcgc
gtggcgctggaagagcgggtgctggtcaccacgctgaccaagcgcatgtccgaagacctg
actgattacctggccgaccacggcgtgcgggtgcgttatctgcactcggacatcgatact
gtggagcgcgtggagattattcgcgacctgcggctagggactttcgacgtgctggtgggg
atcaacctgctgcgcgaaggcctggatatgccggaagtgtcgctggtggcaattcttgac
gctgataaggaaggttttctgcgctccgagcgctcgctgatccagaccattggtcgtgcg
gcccgtaacctcaatgggcgggcgattctctatgcggaccgcatcaccggctccatggag
cgcgcgattggcgaaaccgagcgccgtcgcgacaagcagatcgccttcaaccttgcgaac
gggattacccctaaaggcgtgttcaaggatgtcgccgacatcatggaaggcgccaccgtg
ccgggctcgcgcagcaagaagcgcaaaggcatggccaaggcggcggaggaaagcgccaag
tacgaaaacgaactgcgttcaccgagcgagatcaccaagcgcatccgtcagttggaagaa
aagatgtaccagttggcccgcgacctggagttcgaagctgcggcgcagatgcgcgacgaa
atcggcaagctgcgtgagcggttgttgaccgtatag
DBGET
integrated database retrieval system
