Pseudomonas phytophila: K3169_22930
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Entry
K3169_22930 CDS
T09747
Name
(GenBank) DEAD/DEAH box helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
ppao
Pseudomonas phytophila
Brite
KEGG Orthology (KO) [BR:
ppao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppao03009
]
K3169_22930
Enzymes [BR:
ppao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
K3169_22930
Ribosome biogenesis [BR:
ppao03009
]
Prokaryotic type
rRNA helicases
K3169_22930
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
Abhydrolase_1
Motif
Other DBs
NCBI-ProteinID:
UXZ95160
LinkDB
All DBs
Position
complement(5094474..5095820)
Genome browser
AA seq
448 aa
AA seq
DB search
MFSQFALHERLLKAVAELKFVEPTPVQAAAIPLALEGRDLRVTAQTGSGKTAAFVLPILN
RLMGPAKVRVDIRAVILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRK
VPDILIGTPGRLLEQLNAGNLDLKNVEVLVLDEADRMLDMGFSEDVERLANECANRQQTL
LFSATTGGAGLREMIGKVLNNPQHLQVNSVSELASGTRQQIITADHNSHKEQIVHWLLAN
ETYQKAIIFTNTKALADRLYGRLVALDYKAFVLHGDKDQKDRKAAIDRLKQGGTKVLVAT
DVAARGLDVEGLDLVINFDMPRSGDDYVHRIGRTGRAGAEGLAISLICHGDWNLMSSVER
YLKQTFERRTIKEVKGSYGGPKKVKASGKAVGVKKKKTDAKGDKKKTGAKAPTKRKIANR
PKTDALSLVSKDGMAPLKKRKTETPAAE
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtgttttcccaattcgccctgcatgaacgcctgctaaaagccgtggccgagcttaaattc
gtcgagccgacgccagtgcaagctgccgccatacctctggcgctggaagggcgtgatctg
cgggtgacggcgcaaaccggcagcggcaagactgctgcatttgtattaccgatcctcaat
cgtctgatgggcccggccaaggttcgcgtcgacattcgtgccgtgatcctgctgccgacc
cgtgaactggcgcagcagacgctcaaggaagtcgagcgtttctcgcagttcacgttcatc
aagtccggcctgatcaccggcggcgaagacttcaaggtccaggccgccatgctgcgcaag
gtgccggatatcctgatcggcaccccaggccgtttgctggagcaattgaacgctggcaac
ctggacctgaagaacgttgaagtgctggtcctcgacgaagctgaccgcatgctggacatg
ggcttctccgaagacgtcgagcgtctggcgaatgaatgcgccaaccgccaacagaccctg
ttgttctcggccaccaccggcggtgccggtctgcgcgaaatgattggcaaggtgttgaat
aatccgcagcacctgcaagtcaacagcgtcagcgagctggcttccggtacccgtcagcag
atcatcaccgctgaccacaacagccacaaggaacagatcgtccactggctgctggccaac
gagacgtatcagaaggcgattatcttcactaataccaaagctctggccgaccgcctgtat
ggccgtctggtagcactggattacaaagctttcgtgttgcacggcgacaaggaccagaaa
gaccgcaaggccgctatcgaccgtctgaagcagggcggcaccaaggtgctggttgctacc
gacgtcgccgctcgtggcctggacgttgaaggtctggacctggtgatcaacttcgacatg
ccgcgcagtggcgatgactacgttcaccgtatcggtcgtaccggccgtgcgggtgcagaa
ggcctggccatctcgttgatctgtcacggcgactggaacctgatgtccagcgtcgagcgc
tacctcaagcagaccttcgagcgtcgtaccatcaaggaagtcaaaggcagctacggcggg
ccgaagaaggtcaaggcttcaggcaaagccgttggcgtgaagaagaaaaagaccgacgcc
aagggcgacaagaagaaaaccggtgccaaggccccaaccaagcgcaaaatcgccaaccgg
ccgaagaccgacgccttgtcgctggtcagcaaagacggcatggccccgctgaaaaagcgt
aagaccgaaacgcctgcggctgagtaa
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