Pseudomonas phytophila: K3169_23540
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Entry
K3169_23540 CDS
T09747
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
ppao
Pseudomonas phytophila
Brite
KEGG Orthology (KO) [BR:
ppao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppao03032
]
K3169_23540
03036 Chromosome and associated proteins [BR:
ppao03036
]
K3169_23540
03400 DNA repair and recombination proteins [BR:
ppao03400
]
K3169_23540
DNA replication proteins [BR:
ppao03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
K3169_23540
Chromosome and associated proteins [BR:
ppao03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
K3169_23540
DNA repair and recombination proteins [BR:
ppao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
K3169_23540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
SSPI
NTS
HTH_IclR
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
UXZ95277
LinkDB
All DBs
Position
complement(5239269..5239550)
Genome browser
AA seq
93 aa
AA seq
DB search
MALTKDQLIADIAEAIDAPKTTARNALEQLGQIVADQLENGAEITLPGIGKLKVAERPAR
TGRNPSTGAAIEIAAKKVIKFVPAKVLNDSINK
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atggctctgactaaagaccaattgatcgccgatatcgcagaagctatcgacgcgccaaaa
accaccgcgcgtaatgctcttgagcaattgggccaaattgttgccgaccaactggaaaac
ggcgctgaaatcactctgccgggtatcggcaaactgaaagtagccgagcgtccagctcgc
actggccgcaacccttcgactggcgctgccatcgaaatcgctgccaagaaagtcatcaag
ttcgtaccagctaaagtgctgaacgactcgatcaacaagtaa
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