Pseudomonas phytophila: K3169_23815
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Entry
K3169_23815 CDS
T09747
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ppao
Pseudomonas phytophila
Pathway
ppao02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppao00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K3169_23815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppao03021
]
K3169_23815
Transcription machinery [BR:
ppao03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K3169_23815
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
PhyR_sigma-like
HTH_23
HTH_3
HTH_24
GerE
HTH_11
HTH_38
HTH_28
TBC1D_hel
Phage_terminase
DUF2774
TnsD
Motif
Other DBs
NCBI-ProteinID:
UXZ95329
UniProt:
A0ABY6FBT5
LinkDB
All DBs
Position
complement(5305082..5305627)
Genome browser
AA seq
181 aa
AA seq
DB search
MRDTPAPDDDLILRHRQFTALYSDHHSWLHGWLRKKLGCSQRAADLAHDAFIRILTLAEP
QNLKEPRAFLTTTATRLLIDGARRRKIEHAYLEALALSADDANIPSPEAIHAALQMLDKI
SRMLEGLPPKPREAFLLNRLDGLSYNEIAKVLGVSASMVKQYMASVLVHCYKTVHGSGHM
S
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgacactcctgcacccgatgacgacctgatccttcgtcaccggcaatttactgcc
ctctacagtgaccatcactcctggttgcatgggtggctgcgtaaaaagctcggttgttcg
cagcgtgcggctgaccttgctcatgacgccttcatccgaatcctgacgctcgctgaaccg
caaaaccttaaagagcctcgtgcattcctgaccaccaccgccacgcgtctgctgatcgac
ggtgcccggcgtcgcaagatcgagcatgcctaccttgaggcgttggctctcagcgccgac
gatgccaatatccctagccctgaggcgattcacgccgccctgcagatgctcgacaaaatc
tcccgaatgctggagggcttgccccccaaaccccgcgaagcgtttttactcaaccgtctg
gacggtttgagctacaacgaaatcgccaaggtgttgggtgtgtccgccagcatggtcaag
cagtacatggccagcgtattggtgcattgctataagactgtgcatggttcgggccacatg
tcatga
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