Pseudomonas phytophila: K3169_25205
Help
Entry
K3169_25205 CDS
T09747
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ppao
Pseudomonas phytophila
Pathway
ppao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K3169_25205 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppao03019
]
K3169_25205 (pnp)
03016 Transfer RNA biogenesis [BR:
ppao03016
]
K3169_25205 (pnp)
Enzymes [BR:
ppao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
K3169_25205 (pnp)
Messenger RNA biogenesis [BR:
ppao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
K3169_25205 (pnp)
Transfer RNA biogenesis [BR:
ppao03016
]
Prokaryotic type
tRNA degradation factors
K3169_25205 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH-I_KHDC4-BBP
S1_RRP5
KH_2
OB_RRP5_4th
S1_2
KH_PNO1_2nd
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
UXZ95581
UniProt:
A0ABY6FCJ4
LinkDB
All DBs
Position
complement(5609024..5611129)
Genome browser
AA seq
701 aa
AA seq
DB search
MNPVIKKFQFGQSTVTLETGRIARQASGAVLVTVDDDVTVLVTVVGAKTADPSKGFFPLS
VHYQEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGFMNEVQVVCTVVST
SKKTDPDVAAMIGTSAALAISGIPFDGPIGAARVAFHESTGYLLNPTYEQLKASSLDMVV
AGTEEAVLMVESEAKELTEDQMLGAVLFAHDEFQSVIKAVKELAAEAAKPTWAWTPKPEA
TSLLSAIRAEFGDAISQAYTITVKADRYARLGELKDQIVAKLAVEEGSPSASEVKAAFGE
IEYRTVRENIVNGKPRIDGRDTRTVRPLNIEVGVLPKTHGSALFTRGETQALVVATLGTA
RDAQLLDTLEGEKKDPFMLHYNFPPFSVGECGRMGGAGRREIGHGRLARRSVQAMLPAAD
VFPYTIRIVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGEKFAILT
DILGDEDHLGDMDFKVAGTAKGVTALQMDIKIKGITEEIMEIALGQALEARLNILGQMNQ
IIGQSRTELSENAPTMIAMKIDTDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIFG
ETKEAAEAARQRVLGITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDARV
EKVTDILKEGEEVEVLVLDVDNRGRIKLSIKDVAAAKASGV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccggtaatcaagaaatttcaattcggtcaatcgaccgtaaccctcgagactggc
cgtattgcccgtcaagcttcaggtgctgtattggtcaccgttgacgacgacgtcaccgta
cttgtgactgtggtcggcgccaagacagcagacccaagcaaaggcttcttcccactttcc
gtgcactaccaggaaaaaacctacgctgcaggtaaaatccctggtggcttcttcaagcgt
gaaggccgtccttccgaaaaagaaaccctgacttcccgtctgatcgaccgtccgatccgt
ccgctcttcccggaaggcttcatgaacgaagtgcaggttgtctgcaccgtcgtttccacc
agcaagaaaaccgatccggacgtcgctgcgatgatcggtacttcggctgctctggcaatc
tccggcattcctttcgatggcccgatcggcgcagctcgcgttgctttccacgaaagcacc
ggctacctgctgaacccgacctacgagcaactcaaggcttcgagcctggacatggttgta
gccggtacagaagaagccgttctgatggttgaatcggaagccaaagagctgactgaagac
cagatgctgggcgcagtactgttcgcccacgacgaattccagtcggtgatcaaggctgtt
aaagaactggccgccgaagctgccaagcctacctgggcctggacgccgaagcctgaagcc
acttcgctgctgagcgctatccgcgctgagttcggcgacgcgatttcccaggcttacacc
atcactgtaaaagctgaccgttacgcgcgtctgggcgagctgaaagatcagatcgttgcc
aaactcgctgtagaagaaggcagcccgtctgccagcgaagtcaaagcagctttcggtgaa
atcgaataccgcaccgttcgtgagaacatcgttaacggcaagccacgtatcgacggtcgc
gacactcgcactgtgcgtccgctgaacatcgaagtcggtgttctgccgaagactcacggt
tcggctctgttcacccgtggcgaaactcaggcactggttgttgccactctgggtaccgca
cgtgacgcgcagttgctcgataccctggaaggcgagaaaaaagacccgttcatgctgcac
tacaacttccctccgttctcggtgggcgagtgtggtcgtatgggcggtgctgggcgtcgt
gaaatcggtcacggccgtctggctcgccgttcggttcaggccatgctgcctgccgctgac
gtgttcccgtacaccatccgtatcgtctcggaaatcaccgagtccaacggttccagctcc
atggcttccgtttgcggtgcttccctggcgctgatggacgctggtgtaccgatgaaggca
cctgttgccggtatcgccatgggtctggttaaagaaggcgagaagttcgccatcctgacc
gacatcctgggtgacgaagaccacctgggcgacatggacttcaaagtagccggtaccgct
aaaggtgttaccgcgctgcagatggacatcaagatcaagggcatcaccgaagaaatcatg
gaaatcgctctgggccaagccctggaagcgcgcctgaatatccttggccagatgaaccag
atcattggtcagtcgcgtactgagctgtcggaaaacgctccgaccatgatcgcgatgaaa
atcgacaccgacaaaatccgtgatgttatcggtaaaggcggcgcgaccatccgtgcaatc
tgtgaagagaccaaagcctcgatcgatatcgaagacgacggctcgatcaagatcttcggc
gaaaccaaggaagcagctgaagcggcacgtcagcgcgttctgggtatcactgctgaggcc
gagatcggcaagatctatgtgggcaaggttgagcgcatcgtcgacttcggcgcattcgtc
aacatcctgcctggcaaggacggtctggttcacatatccatgctgagcgatgctcgcgtt
gagaaagtgactgacatcctgaaagaaggcgaggaagtcgaagtgctggtactggacgtc
gacaaccgtggccgcatcaagctgtcgatcaaagacgttgctgctgcgaaagcatcgggc
gtctga
DBGET
integrated database retrieval system
