Pseudomonas phytophila: K3169_26605
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Entry
K3169_26605 CDS
T09747
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ppao
Pseudomonas phytophila
Pathway
ppao03030
DNA replication
ppao03430
Mismatch repair
ppao03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K3169_26605 (holA)
03430 Mismatch repair
K3169_26605 (holA)
03440 Homologous recombination
K3169_26605 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppao03032
]
K3169_26605 (holA)
03400 DNA repair and recombination proteins [BR:
ppao03400
]
K3169_26605 (holA)
Enzymes [BR:
ppao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K3169_26605 (holA)
DNA replication proteins [BR:
ppao03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K3169_26605 (holA)
DNA repair and recombination proteins [BR:
ppao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K3169_26605 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
DNA_pol3_gamma3
CCCAP
Motif
Other DBs
NCBI-ProteinID:
UXZ95835
LinkDB
All DBs
Position
5952820..5953857
Genome browser
AA seq
345 aa
AA seq
DB search
MKLAPAQLGKHLQGALSPVYIVSGDDPLLCQEAADAIRAAARQQGFDERQVFSADSSFDW
GTLLQAGASMSLFAERRLLELRLPSGKPGDKGAAALMEYCARPAEDTLLLISLPKLDGSA
QKTKWGKALVEGAQTQFVQIWPVDAGQLPQWIRQRLSQSGLAATQDAVELIAARVEGNLL
AAAQEIEKLKLMAEEGQITVETVQAAVADSARFDVFGLTDAILNGEASHALRMLEGLRGE
GVEPPVILWALSRELRVLANLALQFSQGMPLDKAFSSARPPIWDKRKPLMSKALQRYSAK
RWAELLMDAQRIDAQIKGQAVGSPWSSLSRLSLLMAGQRLALPAE
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcgcccccgcccaacttggcaaacacctgcaaggtgctctctcgcccgtttac
atagtcagcggcgacgatccactgctgtgccaggaagccgccgacgcgattcgagctgcg
gcccgacagcaaggttttgacgaacgccaggtcttcagcgccgactccagtttcgactgg
ggcacgctgctgcaggccggcgcaagcatgtcgctgttcgccgagcgccgactgcttgag
ttgcgccttccctccggaaaacctggagacaaaggggctgctgccttgatggagtactgc
gcccgccccgccgaagacacgctgctgttgatcagcttgccaaagcttgatggcagcgcg
cagaaaaccaaatggggtaaagcgctggtcgaaggtgcgcagacccagttcgtgcaaatc
tggccggtagatgccgggcaattaccccaatggattcgccaacgcctgtctcaatccggg
ttggcagccacccaagatgccgtcgagttgatcgcggcgcgagtggaaggcaatttgctg
gccgccgctcaggaaatcgaaaagctcaaactgatggccgaagaaggccagattactgtc
gagaccgtacaggcagccgtagctgacagcgcgcgtttcgacgttttcgggctgaccgat
gccatcctcaacggcgaggcttctcacgccttgcgcatgcttgagggcctgcgaggcgaa
ggtgtcgagccgccagtgattctctgggctctctctcgagagctgcgagtactggcaaac
cttgcactgcaattcagtcagggcatgccattggacaaagcgttcagttccgcccgtccg
cccatctgggacaagcgcaagccgctcatgagcaaagcactgcaacgctattccgccaaa
cgctgggccgaactgctgatggatgcgcaacgcattgatgcgcagatcaaaggccaggca
gttggctcgccttggagtagtttgagccggttgtcactgctgatggcaggtcagcgtctg
gcgttgccagcggagtaa
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