Pseudomonas phytophila: K3169_28855
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Entry
K3169_28855 CDS
T09747
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ppao
Pseudomonas phytophila
Pathway
ppao03420
Nucleotide excision repair
ppao03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K3169_28855 (uvrD)
03430 Mismatch repair
K3169_28855 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppao03400
]
K3169_28855 (uvrD)
Enzymes [BR:
ppao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K3169_28855 (uvrD)
DNA repair and recombination proteins [BR:
ppao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K3169_28855 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
K3169_28855 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
UXZ96239
LinkDB
All DBs
Position
6428856..6431039
Genome browser
AA seq
727 aa
AA seq
DB search
MRDDLSLLLNSLNDAQRQAVAASVGRQLVLAGAGSGKTRVLVHRIAWLIQVEQASPHSVL
SVTFTNKAAAEMRHRIEQLMGINPAGMWVGTFHGLAHRLLRAHWQEANLAQTFQILDSDD
QQRLVKRVMRELGLDEQRWPVKQATWFINGQKDEGLRPKHIQASGDLFLTTMKSVYEAYE
VACQRAGVIDFSELLLRALDLWRDNPGLLAHYQRRFRHVLVDEFQDTNAVQYAWLRLLAQ
GGDSLMVVGDDDQSIYGWRGAKIENIHQYSSDFPDTEVIRLEQNYRSTASILKAANGLII
NNSGRMGKELWTDVGDGELINLYAAFNEHDEARYVVETIESALKTGLARSEIAILYRSNA
QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLLEGRGNDAALERIINVPARGI
GEKTVESIRQHARHADVSMWEATRQLIANKGLTGRAAGALGGFVELIENLAAKVMEMPLH
LMTQTVIEQSGLINYHKEEKGEKGQARVENLEELVSAARNFENNEEDAELTPLAAFLGHA
SLEAGDTQAEEHEDSIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMQQLVMTYAETRRLYGSETYNKVSRFVREIPPLLIQEVRLSNSVTRPFGGTQ
KVSNSSLFNGTGIPETAFSLGQRVQHAVFGEGVILNFEGAGAQARVQVNFAEGSKWLMMG
YAKLEAI
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgatctctcccttctgcttaattccctcaacgatgcccaacgtcaggccgta
gctgcctccgtgggtcgtcagttggtcctggccggcgctggttccggcaaaacccgtgtg
ctggtgcatcgcatcgcctggttgatccaggtcgagcaagcctcgccacattcggtcctg
tcggtgacgttcaccaacaaggcggcagcagaaatgcgccaccggatcgaacaactgatg
ggcatcaacccggcaggcatgtgggtgggcacgttccacggccttgcgcaccgcttgttg
cgggcgcactggcaggaagccaatctggcgcagaccttccagatcctggacagcgacgac
cagcaacgcctggtcaagcgcgtcatgcgcgagctggggcttgatgaacaacgctggccc
gtcaaacaagccacgtggtttatcaacggtcaaaaagacgaaggcctgcgcccgaagcat
attcaggccagcggcgatctgtttctgactaccatgaagtcggtctatgaagcctatgag
gtcgcctgccagcgtgccggcgtgatcgatttctccgagctgctgctgcgtgcactcgac
ctttggcgcgacaatcccggcctgcttgctcactatcagcgccgcttccgccatgtgctg
gtggacgaattccaggacaccaacgccgtgcagtacgcatggctgcgcttgctggcgcag
ggtggcgacagcctgatggttgtgggcgatgacgaccagtcgatttacggctggcgcggc
gcgaagatcgagaatatccaccagtattcgtcggacttcccggacaccgaagtcattcgt
cttgagcagaactatcgctcgaccgccagtattctcaaagcggccaacggcctgatcatc
aataacagcggccgcatgggcaaagagctgtggactgatgtcggtgatggcgagctgatc
aatctgtacgcggcattcaacgaacacgacgaagcccgctacgtggttgaaaccattgaa
agcgcactcaagaccggtcttgcccgtagcgaaatcgccattctgtatcgctccaacgcc
caatcccgggtgcttgaagaagcgttgctgcgcgagcgaattccgtaccgcatttatggc
ggccagcgcttcttcgaacgcgccgaaatcaagaacgccatggcttatctgcgcttgctg
gaaggccgtggcaacgatgcggcactggagcggatcatcaacgtgccggcccgtggcatc
ggtgaaaaaaccgtcgaatcgattcgtcagcatgctcgccatgccgatgtttcgatgtgg
gaagccactcgccaactaatcgccaataaaggtctgaccggccgtgcggcaggcgcgctg
ggcggtttcgtcgagctgatcgaaaaccttgccgccaaggtcatggagatgccgctgcat
ttgatgacgcaaaccgtcatcgagcagtccgggctgatcaactaccacaaggaagagaaa
ggcgaaaaaggccaggctcgggtagaaaaccttgaggaactggtcagcgccgcgcgcaac
ttcgaaaacaacgaagaagacgccgagctgacaccgttggcggcattcctcggccatgct
tcgctggaggccggggatacccaggccgaagagcacgaagacagcattcaattgatgacc
ttgcacagcgccaagggccttgaattcccttacgtgttcctggtgggcatggaagaaggc
ctgttcccccacaagatgagcctggaagagccgggccgtctggaagaggaacggcgtctg
gcctacgtcggcataacccgcgccatgcaacagctggtgatgacctacgcagaaacccgt
cgcctgtacggcagcgagacctacaacaaggtgtcgcgcttcgtacgtgaaattccgcca
ttgctgattcaggaagtgcgcttgtccaatagtgtcacccgaccttttggcggcacgcag
aaggtcagcaacagcagcctgttcaatggcaccggtattccggagacagccttcagcctt
gggcagcgtgtgcaacatgcggtgtttggcgaaggcgtgatcctgaacttcgaaggcgct
ggcgctcaggcgcgtgtccaggtcaacttcgccgaaggcagcaagtggctgatgatgggc
tacgcgaagctggaagctatttag
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