Phlebotomus papatasi: 129797906
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Entry
129797906 CDS
T10447
Name
(RefSeq) probable DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
ppap Phlebotomus papatasi
Pathway
ppap03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
129797906
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppap03400
]
129797906
DNA repair and recombination proteins [BR:
ppap03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
129797906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
DUF4778
Motif
Other DBs
NCBI-GeneID:
129797906
NCBI-ProteinID:
XP_055696758
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Position
1:complement(85952797..85960901)
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AA seq
1136 aa
AA seq
DB search
MSKRLSDTPKNTLFNYFSRTPPAAGSSPKIAAKTPAQTTASPSTPKSALNASKNVGKRIL
STEKPEKSTPISKHANGDEEIVSQKKKRRRIITSDSEDSDRENDNLQVNSDKRQCDSPVS
RAVVAKKVKMEGVETSKLTIEEKLASLTKTEPNEVPDELEMTSIVEDEATVWLHNKLEFL
KPENIRDAKKRRPDHPDYDPNTLYVPDSFMKNLTPGMYQWWVMKAQHNDCVILFKVGKFY
ELYHMDAVVGVNELGFTYMKGEFAHSGFPEQAYDRMATSLVEKGYKVARVEQTENPEMMQ
ERCKKQKSVTKFDRVVKREICQITNRGTRVFGQQVQLTGDFQPQYMLAIAEIAGGMTSTY
GICFIDTSIGMFHIGQFEDDKHSSRMLTLLAHNTPVLVLFQKNGLSERTRQIFKTMLSSA
LKDPLSESQMWDASTTLKNLAEKYFLTDDGTNWPEIFKEMQDDCDHLGLTPKKNYSLALK
ALGGCIFYLTRCLLDQQILSLARYQFYQPPDVTESVNKLEENISRASQKLNKSKNMVLDS
ITLQNLKIIGEEGSLMETLDHCCTKFGKRLLHNWICSPSCDISVIRKRQEAVSELVDRPI
LLQDIRSLLGSLTDLERQLAQIHSFSSYGRFKDHPDSRAILYEEVQYGKKKIQDFISVLK
GFKALLKLPGLTAKCSSEFLIYLSQNSPEGTFPDFSADLDFFEKAFDHEEALKEGIIAPE
HGVDKEFDAIEEEIKDIEMEFKEYVKIQEKYFNCKVTVGTNRNRYQLEIPESFAKKAGSE
YSLESQQGKKGGKGIKRYHTDETKDLLKRITVAENQRKKVLKDLSRRIFEKFSNNHDVWK
QCVSNVAILDVLTSFAEYARNSRETCVPEIIDEDCEPFMELEDGYHPCLTGNEDFIPNGI
ILGAPQTALTILTGPNMGGKSTLMRQVGLLAVMAQVGSRIPASRCRMTLIDRIFTRLGAQ
DDILAGHSTFLVELSETSAILKHATINSLVLLDELGRGTATYDGTAIAASVVNFLADLKC
RTLFSTHYHSLVDNFHRDGRITLGHMACMVENEDSDDPTQETVTFLYKYADGPCPKSYGF
NAAKLAGMPTTIIRRAHELSKKVESSALKRKIFSRILSNGNPEEIRNLLAKLKACG
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagcgattgagtgataccccgaaaaataccctcttcaactacttcagcagaact
cctccggctgccggaagttccccaaaaatagctgccaaaacacctgcccaaacaactgca
tccccatcgactcctaaatcagctctgaatgcttctaaaaatgtagggaaacgtatcttg
agcacagagaaaccagaaaaatccaccccaatttccaagcatgcgaatggtgatgaagag
attgtgtctcagaagaagaaaagaaggaggattatcacgtcagattctgaggattctgac
cgggagaatgataatctccaggtgaattctgataaaagacaatgtgattcaccagttagt
agggcagttgtggcgaaaaaggtgaagatggagggtgtagaaacgagtaaattaaccatt
gaagagaaactggccagtttgacaaaaactgagccaaatgaagttccggatgaactggag
atgacgagtatagttgaggatgaggctactgtgtggttacacaataagctggagtttctc
aagcccgagaatatccgggatgccaagaaaaggaggcctgatcatcctgactacgatccg
aatactctgtatgttccggattcgttcatgaagaatctgactccgggaatgtatcagtgg
tgggttatgaaagcccagcacaatgactgtgtgatattgtttaaggttgggaagttctat
gagctgtatcatatggatgctgttgtgggagtcaatgagttgggatttacgtacatgaag
ggagaatttgctcattctggcttcccagaacaggcttatgatcgcatggccacgagcctg
gtggagaagggctacaaagtggctcgggtggagcaaactgagaatccggagatgatgcag
gagcgctgcaagaagcaaaaatccgtgacaaaattcgatcgtgtggtcaagagagaaatc
tgtcagatcacaaacagaggaacgcgagtttttggccagcaagtacagctcacgggggat
tttcagccacagtacatgctggcaattgctgaaattgccggagggatgaccagtacctac
gggatttgcttcattgacacatcaattgggatgtttcatattgggcagtttgaagatgac
aaacacagttccaggatgctgactctcctggcacacaacacgcccgtcctggtactgttc
cagaaaaatggtctgagcgagagaactcggcagatcttcaagacaatgctgtcaagtgct
ctcaaagatcctctcagtgaatctcaaatgtgggatgcctccacgacgctcaagaatctc
gcggaaaagtacttcctcacggacgacggcacaaattggccagagattttcaaggaaatg
caggatgattgtgaccacttggggctgactccgaagaaaaattactccctggctctcaaa
gcactcggaggatgcattttctacctcaccagatgcctcctggatcaacaaatcctctct
ctagctcgctatcaattctaccagccacccgatgtcacggaatccgtgaataagcttgag
gaaaacatctctagagcctcccaaaaactcaataaatccaagaatatggttctggattcc
ataactctgcagaacttgaagattatcggcgaagagggctccctaatggagaccctggat
cactgttgcacgaaattcgggaagagactcctgcacaactggatttgctctcccagctgc
gacatctctgtcatccggaagcgtcaggaggcagtttctgaactcgtcgataggccaatc
ctgctccaggatatccgatcgcttttgggatctctgacggatcttgagcgacaactcgcc
caaattcattccttcagcagctacgggcgctttaaggatcatccggacagccgtgcgatc
ctctatgaggaagttcagtatggaaaaaagaagatccaggactttatctcggtcctcaag
ggctttaaagccttgcttaaattaccaggactcacggcgaaatgctcaagtgaattcctg
atctacctgagtcagaacagtcctgaaggaaccttcccggatttctctgcagacctagac
ttcttcgagaaggcttttgaccacgaggaagcccttaaagagggcataattgctccagaa
catggagttgacaaggaattcgatgctattgaggaagaaatcaaggacattgaaatggaa
ttcaaggaatatgtcaagatccaggaaaaatacttcaactgcaaggtcaccgtaggaacc
aatcgtaatcgctaccaattggaaattccagaaagttttgccaagaaagctggctcggaa
tattccctggagagtcagcagggaaaaaagggcgggaagggcatcaagaggtatcacacg
gatgagacaaaagatcttctaaagagaatcacagtagctgagaatcagagaaaaaaagtt
ctaaaagatctgtcaaggaggatctttgagaaattctccaacaatcacgatgtctggaag
cagtgtgtatcaaatgttgccatcctggatgttctaacatccttcgcagagtacgccaga
aattcccgggagacctgcgttccggaaataatcgatgaagactgtgagccatttatggaa
ctcgaagatggataccatccatgcctgaccggcaatgaagacttcatcccgaatggcatt
atcctaggagctcctcagactgccctgacaatcctcacgggaccaaatatgggcggcaaa
agtaccctaatgcggcaagttggccttctggctgtgatggctcaagtgggatcacgaatc
ccagcatcacgctgtcgcatgaccctcatcgatcgcattttcactcgtctgggagctcag
gatgacatcttggcaggacatagcaccttccttgtcgaactcagcgagacctcagccatt
ctcaaacatgccacaatcaacagtttggtcctactcgatgaacttggccgtggaactgcc
acttacgatggcactgcaattgcagcgtctgtcgtcaacttcctggccgatctcaagtgt
cgcaccctcttttccacgcactatcacagtctcgtggacaatttccatcgggatggacga
ataactctgggccatatggcctgcatggtggagaatgaggatagcgatgatccaactcag
gaaacagtcactttcctctacaaatatgccgatggaccttgtcccaaatcctatggattc
aatgctgccaaattggccggaatgccaaccaccatcatccggagggcacatgagttgtcc
aaaaaggtggaatccagtgcgctgaaaagaaagattttctctcggattctgtccaatgga
aatcccgaggagatccgaaatcttctggccaaactcaaggcatgcggctaa
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