Phlebotomus papatasi: 129798559
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Entry
129798559 CDS
T10447
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
ppap Phlebotomus papatasi
Pathway
ppap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129798559
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppap03019
]
129798559
Messenger RNA biogenesis [BR:
ppap03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
129798559
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
129798559
NCBI-ProteinID:
XP_055697733
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Position
1:5411279..5413925
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AA seq
790 aa
AA seq
DB search
MSNDSSIDELDTSGVQEVSLDGGESSQSESIEELTKGGLAKIINATKASMTLPSGASRDL
YTAQPSFIRVVNQESDKILDILGKILKHQSVRGNIKRRDDDEKTDLVLECNDTMLERINS
NLDEMSGLKKAPEVVLVQADAVVNSKEKKRSLLSGKNAQEAKLLTAKNILRPQVNFKVPV
DNRNSTPFEPRIKYKPNSLKPLAILAEYGEDGSIESYLHPYEVELNKFEVPEDQLKKVVP
KKPKNLEETPLVFVENAEKLEEVVEELGKCKEIAVDLEHHSYRSFQGFTCLMQMSTREKD
YIIDTLALREDLHVLNEIFTRPSIVKVFHGADCDIEWLQKDLSLYIVNMFDTHQAARKLN
FARASLAYLLKHFCQFEADKTFQLADWRIRPLPQELIAYARQDTHSLLYIYDMLRNELLK
KANFQTNWLKSVYQQSTEICKKRYIKMRLTSDSHMNLYMRSKKNFDNRQLYAFREIYHWR
DALAREEDESCGYVLPNHMLFHIAELLPREMQGILACCNPVPPHVRQHLLHLHKIVLKAR
EQPLEKVIVTEEAPRLAPGSAININSFLYCPHDLRQVAERDNLPTLLAGNLQKTTHGKSL
KKAHPQVTVFARQIPKKSLPKVAFVSPYQRYRAVIPIAEEERRKAQQIEEAIKQKRRLCP
ESSEILPKIHHEVKTEPEQIPKKRKPEATTNEQKGKIPRVETQREKSESTSGASQSPGSN
KLSRNQKKKQKKMQNEKKLAEFDYTSVDFRKFQGGSKANEKPGRQEFASKFRSRGQKAKN
ADKRLNKIFR
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgatagtagcatagatgagttagatacctcaggtgtgcaggaggtatctctg
gatggaggagaatcctctcagagcgagtcaattgaggaactcactaaaggagggcttgca
aagatcatcaatgccacgaaagcttctatgacactgccctcaggtgcgtccagggacttg
tacactgctcagccatcatttattcgcgttgtcaatcaagaatctgataagattcttgac
attcttggtaagatccttaagcatcagagtgttagggggaatataaagaggagagatgat
gatgagaagacggacttggtacttgagtgcaatgacacgatgctggagaggataaattcg
aatcttgatgagatgtcagggctgaaaaaggctccggaagttgtgttggtgcaagctgat
gctgttgttaattcgaaggagaagaaacggtcattgctgagtggaaagaatgcccaggaa
gctaagttgctcacggcgaaaaatattttaaggcctcaggtgaattttaaggttccagtg
gacaacagaaattccacaccgtttgagcctaggatcaagtacaagccaaatagcttgaag
cctctggccattctcgcggaatatggcgaggatggtagcatagagtcatatctgcatcct
tatgaagtggaattgaataagtttgaggtgcctgaagatcagctgaagaaggtagttccg
aagaaaccaaagaatcttgaagaaacacctttggtttttgtggagaatgctgaaaaattg
gaggaagttgttgaagaattgggtaaatgcaaggagattgctgtagatcttgagcatcat
tcgtacagaagcttccagggattcacttgtttgatgcagatgtcgacgagggaaaaggac
tatataattgatactcttgctctccgggaggatctccatgttctcaatgaaatcttcaca
aggcccagcattgtaaaggtcttccatggagctgattgtgacattgagtggctgcagaag
gatctttcactctacattgtcaatatgtttgatacccatcaagctgcccggaaacttaat
tttgccagggcatcgctggcctatttgctgaaacacttttgccagtttgaagctgataaa
accttccagctcgctgactggagaatccggccattgccgcaggaattgatagcttatgct
cgtcaggatactcactctctgctctacatctacgacatgcttcgcaatgagctgctcaag
aaggccaatttccagacgaattggctcaagagtgtctatcagcagagcacagagatctgc
aagaagaggtacatcaagatgagactcaccagtgattcccacatgaatctgtacatgaga
tccaagaagaactttgacaatcgtcagctttatgctttccgggagatctatcactggcgc
gatgccttggccagagaagaagatgagagctgtggatatgtcctgcccaatcatatgctc
ttccacattgctgaactcctgccacgagagatgcagggcatcctggcttgttgcaatccc
gttccgcctcatgtgcgtcagcatctgctgcatctgcacaaaattgtcctgaaagctcgg
gaacagcccctggaaaaggtcattgtaactgaagaagcgcccagattggctcccggaagt
gccattaatatcaacagtttcctctactgtccccacgatttgcgccaggttgcagagaga
gacaatctgcccacacttttagctggaaatcttcagaagactacccacggaaagtcccta
aagaaagcccatcctcaagtcactgtctttgcccgacaaattcccaagaaatctctgcca
aaagtagcttttgtcagtccatatcaaaggtaccgagctgtgatcccaattgcagaggag
gaaagaaggaaggctcagcaaattgaggaggcaatcaaacagaagcgacgactctgtcca
gagtcttcagaaatcctcccaaaaattcatcacgaagtaaaaacagaacccgaacagatt
ccaaaaaaaaggaaacctgaagccactaccaatgagcagaaaggcaaaattcctcgggta
gagactcagagggaaaaatcagaatcaacgagtggtgcatctcaatctccgggaagcaat
aaactaagccgaaatcaaaagaagaagcagaagaagatgcaaaatgagaagaaattggca
gaatttgactacacttcggtcgatttcaggaagttccagggaggctcgaaggccaatgag
aagcccgggaggcaagaatttgcctcaaagttcaggagtcgtggtcagaaggccaagaat
gccgataaacggctcaacaagatctttcgttga
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